Gene RPB_4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4471 
Symbol 
ID3912287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5061218 
End bp5062258 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID637886374 
Productfructose-bisphosphate aldolase 
Protein accessionYP_488065 
Protein GI86751569 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3588] Fructose-1,6-bisphosphate aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCG CCGACCTGAA CACGATCGCC CGCGCCATGG TCGCGCCCGG CAAGGGCATT 
CTCGCCGCCG ACGAATCCTC GGGAACCATC AAGAAGCGGT TCGACGTGAT CGGCGTCGAA
TCGACCGAGA CCAGCCGCCG CGACTATCGC GAGATGATGT TCCGCTCCAA AGAGGCGATG
AACGACTACA TCTCCGGCGT GATCCTGTAC GACGAGACGA TCTGGCAGAA CGCCGCCGAC
GGTACGCCCT TGGTGAAGCT GATCGAGCAG GCCGGCAGCA TCCCCGGCAT CAAGGTCGAC
GAAGGCACCC AGCCACTGCC GAACTGCCCG GGCGAAACCA TCACCGTCGG TCTCGACAAG
CTCGCCGAGC GGCTGGCGAA ATATTACAAG CAGGGCGCGC GCTTCGCGAA ATGGCGCGCG
GTGATCGATA TCGGCGCCGG CATTCCGAGC TACGCCGCGA TCCACACCAA CGCGCATGCG
CTGGCGCGCT ATGCGGCGCT GTGCCAGCAG GCGCAGATCG TGCCGATCGT CGAGCCCGAG
GTGCTGATGG ACGGCGACCA CGACATCGAC CGCTGCTACG AGGTCACCGA ATTCGTGCTC
AAGGAGACCT TCCAGGAGCT GTACTACCAG AAGGTCGCGC TCGAAGGCAT GGTGCTGAAG
CCGAACATGG CGGTCGCCGG CAAGAAGTCG GCCAAGTCGG CCGGCGTGCA GGAAGTCGCG
GAGAAGACCG TGAAGCTGTT GAAGGCCTGC GTGCCGTCGG CGGTGCCGGG CATCGCGTTC
CTGTCGGGCG GCCAGTCCGA CGAGGACGCC ACCGCGCATC TCGACGCCAT GAACAAAATC
GGCGGCCTGA CTTCGGGCCT TCCTTGGGGC CTCACCTTCT CCTACGGCCG TGCCCTGCAG
GCCGCGCCGC AGAAGGCGTG GTCCGGCAAG GCCGACAACG TCGCGGCCGG CCAGGCCGCA
TTCACCCACC GGGCGAAAAT GAACTCGCTC GCCAGCAAGG GCGAGTGGTC ATCCGACCTC
GAAAGCAAGA AGGCCGCATA A
 
Protein sequence
MNLADLNTIA RAMVAPGKGI LAADESSGTI KKRFDVIGVE STETSRRDYR EMMFRSKEAM 
NDYISGVILY DETIWQNAAD GTPLVKLIEQ AGSIPGIKVD EGTQPLPNCP GETITVGLDK
LAERLAKYYK QGARFAKWRA VIDIGAGIPS YAAIHTNAHA LARYAALCQQ AQIVPIVEPE
VLMDGDHDID RCYEVTEFVL KETFQELYYQ KVALEGMVLK PNMAVAGKKS AKSAGVQEVA
EKTVKLLKAC VPSAVPGIAF LSGGQSDEDA TAHLDAMNKI GGLTSGLPWG LTFSYGRALQ
AAPQKAWSGK ADNVAAGQAA FTHRAKMNSL ASKGEWSSDL ESKKAA