Gene RPB_4432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4432 
Symbol 
ID3912247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5022408 
End bp5023223 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID637886337 
ProductIclR family transcriptional regulator 
Protein accessionYP_488029 
Protein GI86751533 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG TTACGTTTAT CGGAATGGTC GGGATGGGTG CTGAAAGTCA GTCGGTTGCA 
CGCGCGGTCG ATATCCTGCA GCTGCTGTCC GACAACGGTT CGCTCGGCGT GCGTGAGATC
GCCCGGCGCA TGGAGTTGTC GCCGACCATC GTGCATCGGC TGGTGAGCAC GCTGGCCTCG
ACGGGCCTCG CGGAGCAGGC CCCGGACACC CAGAAGTACC GCATCGGCTA TCGCGCATTC
CGCATCGGAT CGTCGTTCCT GTCGCAGAAC GATCTCGACC GCGCCAGCAC GCCCGAACTG
GTGGCACTCG CCGAACAGCA TCAGATCAGC AGCTTCCTCG GCGTGCTACG TGGCGGCGCG
ATGGTCTATC TCAAGGTCGT CAAGAGCAAC GGCCCGATCG CGATCAACAA TCAGCCCGGC
TCGCTCGCCG CGATTCACTC CACCGCCTTC GGCAAGGTGA TGCTCGCTGC GCTGCCCGAC
AAGGAGGCCG CCGAGGTGCT CGGCAAGGAA CCCTACAAGC GGCTGACGAA GAAGACCAAG
GTGACGTTCC GCGCGCTGCT CGGTGAGTTG CGCGAGATCC GCGAGACCGG GATCGCGATT
TCCGACGAGG AGAATCTGGT CAACGTCTAT TCGGTCGGCG CCGCTGTGCG GGACGCTTCG
GGCGAGGTGA TCGCCTCGCT CAGCGGTGCA GTGCCGCGAC AGGGGATGAC CAAGCGCGAG
ATCGAACACG TCAACGCGCT GGTGAAGTCG GCGGCCGACA GCGTCTCGCG CAAGATGGGG
GCGCCGTCGG CGCCATCCGG CGGCCGCGGG CGCTGA
 
Protein sequence
MNAVTFIGMV GMGAESQSVA RAVDILQLLS DNGSLGVREI ARRMELSPTI VHRLVSTLAS 
TGLAEQAPDT QKYRIGYRAF RIGSSFLSQN DLDRASTPEL VALAEQHQIS SFLGVLRGGA
MVYLKVVKSN GPIAINNQPG SLAAIHSTAF GKVMLAALPD KEAAEVLGKE PYKRLTKKTK
VTFRALLGEL REIRETGIAI SDEENLVNVY SVGAAVRDAS GEVIASLSGA VPRQGMTKRE
IEHVNALVKS AADSVSRKMG APSAPSGGRG R