| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4425 |
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| Symbol | |
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| ID | 3912240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5014043 |
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| End bp | 5014999 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637886330 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_488022 |
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| Protein GI | 86751526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.241094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CCCGCTGGAC TCCCTACGCC GTTCTCGTCG CGATCGCCCT GCTGGCGGCG
CTGCCTTTGA TGACCGGTTC CAACTACATC GTCGGCATCG CGATTTCGGG GCTGATCTTC
CTCACCGCCG CGGCGGCGCT CAACCTCGTC TACGGCTATG CCGGCCAACT CTCCTTCGCA
CAGCTCGGCT TCTGGGGCGT CGGCGGCTAT TGCGCGGCGA TCGCCGTCGT CGATCTCGGG
CAGAGCTTCT GGTTCGGCAT CGCCTTTGCC GGGGTCGTCA ACCTGCTGCT CTCCGTCGTC
ATCGGCATCG TCATCACACG CACCACGCGC CACGCCTTCG TGGTGGTGAC CCTGACCTTC
GCGCTGCTCG CCGGCCTGAT CGCACGCGAC TGGGTGGGCG TGACCCGCGG CCCGCTCGGC
ATCCCCGGCC TGCCGCCGCC GAGCCTGATG GGATTCGCCT TCGACACCGG CGCCCGGTTC
TACTACATCG CGCTGGTCTT CGCGCTGATC GCGCTGGCTT TCCTGTACAG CCTGAAGACC
TCGCGCATCG GCCTGATCCT GAAGGCTATC AAACAGAACG ATCCGCTGGT GGAATCCCAG
GGCATCGCGC CCGGCCCCTA CAAGCTCGCC GCCTTCGTGA TCGCCTCGGT CATCACCGGC
ATGGCCGGCG GCATCTATGC GTTCAACCTC AAGGTGATCG ATCCGAGCTT CCTCGATTTC
TACTACATGC AGACCTTCCT GATCATCGTC ATCATCGGCG GAGCCGGCAG CTTCTGGGCC
GTCGTGCTGG CGGGCGCCGC GATGGTCGTG CTGCCTGAAG CCCTGCGTTT TTCCAACGAA
CTGCGCATGG TGATCTATGG CGTGGTGCTG GTCGCGGTGA TGATGTTCAT GCCGCGCGGC
GTGGCCGGCT GGCTCGAGGA TCGGCGGATC GCCGCCTTGC GGAAGGCGCT GCGATGA
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| Protein sequence | MTEPRWTPYA VLVAIALLAA LPLMTGSNYI VGIAISGLIF LTAAAALNLV YGYAGQLSFA
QLGFWGVGGY CAAIAVVDLG QSFWFGIAFA GVVNLLLSVV IGIVITRTTR HAFVVVTLTF
ALLAGLIARD WVGVTRGPLG IPGLPPPSLM GFAFDTGARF YYIALVFALI ALAFLYSLKT
SRIGLILKAI KQNDPLVESQ GIAPGPYKLA AFVIASVITG MAGGIYAFNL KVIDPSFLDF
YYMQTFLIIV IIGGAGSFWA VVLAGAAMVV LPEALRFSNE LRMVIYGVVL VAVMMFMPRG
VAGWLEDRRI AALRKALR
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