| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4422 |
|---|
| Symbol | |
|---|
| ID | 3912237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 5009692 |
|---|
| End bp | 5010291 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637886327 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_488019 |
|---|
| Protein GI | 86751523 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1920] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.816566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG TTCTGATCCC CTGCAAACCG CTCGCGTTCG GCAAGTCGCG CCTGGCGAGC
GCGCTCGATC CGATCGGCCG GCGCTGGCTG TGCGAGCGCA TGCTGCGCCG GACGCTGGCG
GCGGCCGTTG CGGCCGTCGG TGCCGAGCAG GTGAGGGTGG TGAGCGCGGA CGCGCATGTC
CACCGCGTCG CCGCGTCGTG CGGCGTGAGC GCGATCGACG ACGAGGCCGA CGGTCTCAAT
GGCGCCCTGG CCGTCGCGCG GCGCCAGCTG CTCCGGGACG TCACGACGCT GGCGCGCCTG
ATGATCCTGC CGATCGATCT GCCCTATGTC GAGCCGGAGA TCCTGCGCCG CGCCGCCGCC
GAAGCCGCGG CGGTGATGAT CGGGCCGGAC CGCAAGTTCG ATGGTACCAA CCTGCTTTGC
GTCGACGCGT GCTACGTGGC TTCGTTTCCG TTCCGCTACG GCCCGGCCAG CTTCCAGCGG
CACGCCGACG CGGCGCGCGC GCTCGGAACG ACGCCGGCCA TCATGGTCGA TCAGCGTATC
GCCTTCGATC TCGACGCGCC GGACGACTAT CGGGAGTGGG CGAATCACGC GGCCGCCTGA
|
|---|
| Protein sequence | MTHVLIPCKP LAFGKSRLAS ALDPIGRRWL CERMLRRTLA AAVAAVGAEQ VRVVSADAHV
HRVAASCGVS AIDDEADGLN GALAVARRQL LRDVTTLARL MILPIDLPYV EPEILRRAAA
EAAAVMIGPD RKFDGTNLLC VDACYVASFP FRYGPASFQR HADAARALGT TPAIMVDQRI
AFDLDAPDDY REWANHAAA
|
|---|
| |