Gene RPB_4392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4392 
Symbol 
ID3912207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4975114 
End bp4976904 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content67% 
IMG OID637886297 
ProductIucA/IucC 
Protein accessionYP_487989 
Protein GI86751493 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGC CTTTGTCCAT GCGCCAGGTC GCTGAACGCG CGACATTCCA GAGCTTTGCC 
AACTGCTATC TGCGCGAGGT CGACCCCGGC GTTCCGTCTG CGCACCAGCC GGAACGCGGC
GGCGCGCCGG TCGACTCCAT CGAATGGTCG TGCCCCGCCG CCGCGGCATC GCTCCGTGCC
GAAATCGAGC GGCATTCGCT GTGCGGGCCG CTCCGCTTCG GGCGAATTTT CGTCTGCCGG
GCGCAGGAGA ACGAGTGGCG CGAGATCGCT CCGCTGCGGG CACTCTATCT GATGGTCCAG
GAATGCTACG CCGGCATGGG CGCAGAGCGG GCAGATGCGC TCCGCCACGA GGAGGCAGGA
CTGCTGGGTC GCGTGCTGAC GAGCTACTTT GGCATCGCCG ACGGCCTGGA ATCGGCGGCA
GGACCCGCTG GACCGAGCTT CATCGATGGC GAGCAGAGCC TGATATTCGG GCACTGGATG
CACCCGACCC CCAAGAGCCT TCAAGGCATC ACGGACTGGC AGCGGCCGAC CTACGCGCCC
GAGTACCGCA GGCGCTTCCG GCTTGTGTTC TTCGCGGTCG ACGCGGCGCT ACTGCGGCAG
GATGCCGCGC CCGGCTGTTC GCTGCCCGAC ATTCTCGAAG CCCTGGTTCC GCCGGACCAA
CGTCCCCGAT TGCATCCAGG TGAGGCGCTG ATTCCCATGC ATCCGCTGCA AGCCGAGGCG
CTGATGCTGG ATCCCGCGAT TGCCGAGCTT GCCGCTGCGG GACGGTTGCG CTGCCTCGGT
CCGATCGGCG CCTTTTTCTC CCCGACCTCC TCGGTCCGGA CGCTCTACAG CGCGGAGGTG
CCGTGGATGC TGAAGTTCTC GCTGCCGGTG CGGATCACCA ATTCGTTGCG CGTGAACCGC
ATGTCCGAAC TGGCAGCGGG CGTCGCGGTC TCGCGCTTGT TCGCGCGAAC GGACTTTGTC
GCGCGCCATC CGAGCTTTCG CCTGATCCGC GATCCCGCCT ATGTCACGCT CGAACTGCCC
GGTCGCAAGG AGAGCGGCTT CGAGGTCGTC TTCCGCGAGA ACCCGTTCAC CAGAGGATTC
GAAAACAACG GCGTGACGAT CGCGGCCTTG ACCGCCGATC CGCCGCCTGG AGCGCGCTCC
AGGCTCGATC GGATCATCCG CGAACTCGCC GCGCGGAGCG GCGAGGCGGT GGGGGACGTC
TGCAGGCGCT GGTTCGCGGC CTATCTCGAC TGCGCGCTCG ATCCGCTGGT CCGGATCTAC
GACGAACTCG GCGTGGCGTT CGAGGCGCAT CAGCAGAACG GCCTGCTCGA CGTCTCGTCC
GGCCTCCCGA GCGCGTTCTA CTATCGGGAC AATCAGGGCT TCTATTTGTC CAACGCCCAC
CGCGACCGGC TGACGGCGCT GGTGCCGGAA ACCGCCGGCA TTGGCGGGCT GTATTTCGAC
GACTGCGTGA TCCAGGAACG CTTCGGCTAC TACTTGATCG TCAATCAGGT GTGCTCGGTG
ATCGCGCGCA TGGGCCAGGA CGAATTGGTC GCCGAAGAGG CGCTGCTCGC CGTGCTCCGC
GACCGGCTGA AGCGCCTCGC GACCGAGCTC ACCGGGGTCG GCGGCGAATT CGCGGCGAGT
TTTCTCAGCC GGCCGACCGT CGCCGCCAAG GCCAACCTGC TCACACGGAT GCTCGACATC
GACGAACTGG AGGTCGAGGA CGGCCGCGCG ATCTATGTGC AGTTGCCGAA TCCGCTGTTC
ACGGCAAGCC GTGCCGCGCG GCAGGGAGGC GCCCGTGCCG CTGCCCTTTG A
 
Protein sequence
MPMPLSMRQV AERATFQSFA NCYLREVDPG VPSAHQPERG GAPVDSIEWS CPAAAASLRA 
EIERHSLCGP LRFGRIFVCR AQENEWREIA PLRALYLMVQ ECYAGMGAER ADALRHEEAG
LLGRVLTSYF GIADGLESAA GPAGPSFIDG EQSLIFGHWM HPTPKSLQGI TDWQRPTYAP
EYRRRFRLVF FAVDAALLRQ DAAPGCSLPD ILEALVPPDQ RPRLHPGEAL IPMHPLQAEA
LMLDPAIAEL AAAGRLRCLG PIGAFFSPTS SVRTLYSAEV PWMLKFSLPV RITNSLRVNR
MSELAAGVAV SRLFARTDFV ARHPSFRLIR DPAYVTLELP GRKESGFEVV FRENPFTRGF
ENNGVTIAAL TADPPPGARS RLDRIIRELA ARSGEAVGDV CRRWFAAYLD CALDPLVRIY
DELGVAFEAH QQNGLLDVSS GLPSAFYYRD NQGFYLSNAH RDRLTALVPE TAGIGGLYFD
DCVIQERFGY YLIVNQVCSV IARMGQDELV AEEALLAVLR DRLKRLATEL TGVGGEFAAS
FLSRPTVAAK ANLLTRMLDI DELEVEDGRA IYVQLPNPLF TASRAARQGG ARAAAL