Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4377 |
Symbol | |
ID | 3912192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4959933 |
End bp | 4960331 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637886283 |
Product | hypothetical protein |
Protein accession | YP_487975 |
Protein GI | 86751479 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2143] Thioredoxin-related protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0754365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATCATA TCATGGCCCG AATGCTTCTG AAATCGATGC TGCTCTGCGC AATGCTGGCG TCGGCGCTCG CCCCGGCGGG CGCATGGGCG GCCGAACTGG TGATGTTCGA GCGCGACGGC TGCGTCTGGT GCGCGCGCTG GGACCGCGAG GTCGGCCCGA TCTACGGCAA GACCGCGGAG GCCAAACTGC TTCCGCTGCG GCGCGTCAAT ATCGACCGCG ACAAGCCGTC CGGCGTTGCG GTAAATTCGC CGGTGATTTT CACGCCGACC TTCGTGGTGA TGGACAATGG CCGCGAGATC GGCCGCATCA CCGGTTACAT CAACGACGAT GCGTTCTGGG GGCTGCTCGG GACCATGGTC GCGAAGCTCA CGCCGCCGCC CGATCCCAAG CACACCTGA
|
Protein sequence | MYHIMARMLL KSMLLCAMLA SALAPAGAWA AELVMFERDG CVWCARWDRE VGPIYGKTAE AKLLPLRRVN IDRDKPSGVA VNSPVIFTPT FVVMDNGREI GRITGYINDD AFWGLLGTMV AKLTPPPDPK HT
|
| |