Gene RPB_4339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4339 
Symbol 
ID3912152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand- 
Start bp4924655 
End bp4925281 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID637886243 
ProductNUDIX hydrolase 
Protein accessionYP_487937 
Protein GI86751441 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.975502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0924805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATC CGCACAACGA CACTTTGCGC GCCGATATCG CCGCGCGCTG CCGCGTCTTT 
CCGCGCCACG ACGACGGGCT GACGCCGCAC GGCCTCAAGC GCGCCGCCGT CGCCATCACG 
GTGGTGGCCG GCGACGACGG CGCGGCCGCG TTCCTGCTGA CGTTCCGGGC CGCGCGGCTG 
CGCGCGCACA GCAACCAGTG GGCGTTGCCG GGCGGCCGCT GCGATCCGGG CGAGACCGCC 
CCCGAGACCG CGCTGCGGGA ATTGCACGAG GAACTCGGGC TGGAACTGCG GGCCGGCGAC 
GTGCTCGGAA TGCTCGACGA CTATCCGACC CGCTCCGGCT ATCTGATCAC GCCGGTGATT 
GCCTGGGCCG CTACCGCGGC GGTGCTCGCG CCCAATCCCG ACGAGGTCGC CTCGGTGCAT 
CACATTGCTC TCGCCGGCAT CGCCCGGGAA GACGCGTTCG ATTTCACGCG GATTCCGGAG 
AGCGAGCGTC GCGTGGTCAG GTTCCGCCAC GACGGTGACT ACATCCACGC GCCGACCGCG 
GCGCTGATCT ATCAGTTCCG CGAAGTGCTG GCCGGCCGGG TGACGCGCGT CGCAGATCTG 
GAACAGCCGG TGTTCGCCTG GAAGTAG
 
Protein sequence
MSHPHNDTLR ADIAARCRVF PRHDDGLTPH GLKRAAVAIT VVAGDDGAAA FLLTFRAARL 
RAHSNQWALP GGRCDPGETA PETALRELHE ELGLELRAGD VLGMLDDYPT RSGYLITPVI 
AWAATAAVLA PNPDEVASVH HIALAGIARE DAFDFTRIPE SERRVVRFRH DGDYIHAPTA 
ALIYQFREVL AGRVTRVADL EQPVFAWK