| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4314 |
|---|
| Symbol | |
|---|
| ID | 3912127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4897715 |
|---|
| End bp | 4898881 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637886218 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_487912 |
|---|
| Protein GI | 86751416 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCT ACGGTCTCTA TACGCACATC GCCGCCAACA GGACCCGCTC GGTCGCGCTG
CTGATCGGGC TGTTTCTGCT GATCTATGTG CTGGTGTTCG CCGGCGCGTT GATCGCCGAG
GTGATGATCG ATGGCGGGCG CTCGGTCGCG TATTATCTCA ATGCGGCGGC GGTCGACCTG
GTGAAGGCGC TGCCGTTCGC CACGCTCGGC GCGGCGCTGT GGATTGTGAT CGCGTATTTC
TTCCATCAGA AGCTGATCGA CGCCGTCACC GGCGGCCATG CGGTGACGCG GCAGGAGCAG
CCACGGCTGT ACAATCTGCT CGAGAACCTG TGCATCTCGC GCGGCATCCC GATGCCGCAA
CTGAAGATCA TGGACAGCGC GGCGCTCAAC GCCTTCGCCA GCGGCCTCAA TCCCAAGCAA
TACGCCATCA CGGTGACGAG CGGCCTTCTG GCCAATCTCG ACGACGCTGA AATCGAGGCG
GTGCTCGGCC ACGAGCTGAC CCACATCCGC AACGGCGACG TGCAGATGAT GGTGATCGCC
GTGATCATCG CCGGCGTGGT CGGGTTCTTC GGCGAGATGA TGTTCCGGCT GTTTTTCCAG
GGCGGCTTCC GCTTCGGCGG CGGCAGCGGC GGGTCGTCGT CCTCCTCGTC GTCGTCATCG
GGAGACCGCA AAAGCGGTGG CGGCGCGATC TTCGTCGTGA TCCTGGCGAT CGCGCTGATC
GTGCTGGCCT GGCTACTGTC GCAAGTGGTC AAGCTGGCGC TGTCGCGCGC GCGCGAATAT
CTCGCCGACG CGGGCTCGGT GGAATTGACC AAGAACCCCG ACGCGATGAT CTCGGCGCTG
CGCAAGATCG AAAACCGCGG CGAACTGGAA GGCGCGACCT CGGCGGTGAT GGAAATGTGC
GTCGACAATC CGCGTTCGGG CTTCGCCGAT TTGTTCGCCA CCCACCCCTC GGTCGAAAAG
CGGGTGGCGG CGCTGGTGCA ATTCGCCGGC GGCCGCGATC CCGGCCCGCT GGCGCTGCCG
TCGCCGGCCG ATGCAACGGA GCCGTCGGCC GACGATTCAG CCGCGCCTGC GGCGCCGGAC
GACGCAGCCC CGCTTGGCCC ATGGAGCGAG CCTTCGCCAC CGCGCGCGCG GCGATTCCTT
CGCGGGCCGT GGGGCAAGCG GGTGTGA
|
|---|
| Protein sequence | MAAYGLYTHI AANRTRSVAL LIGLFLLIYV LVFAGALIAE VMIDGGRSVA YYLNAAAVDL
VKALPFATLG AALWIVIAYF FHQKLIDAVT GGHAVTRQEQ PRLYNLLENL CISRGIPMPQ
LKIMDSAALN AFASGLNPKQ YAITVTSGLL ANLDDAEIEA VLGHELTHIR NGDVQMMVIA
VIIAGVVGFF GEMMFRLFFQ GGFRFGGGSG GSSSSSSSSS GDRKSGGGAI FVVILAIALI
VLAWLLSQVV KLALSRAREY LADAGSVELT KNPDAMISAL RKIENRGELE GATSAVMEMC
VDNPRSGFAD LFATHPSVEK RVAALVQFAG GRDPGPLALP SPADATEPSA DDSAAPAAPD
DAAPLGPWSE PSPPRARRFL RGPWGKRV
|
|---|
| |