| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4300 |
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| Symbol | |
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| ID | 3912113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4885676 |
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| End bp | 4888906 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886204 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_487898 |
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| Protein GI | 86751402 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.371235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTCG GAATCTCGGG CCGCCTGACC AAGGCCACCA TCCTTTCCCC GCTGACGCCG
CTGTTCCTGC TGGCCTCGCT CGTCGTCGGG CTGTTCGCGC TGGTCGCGAT CCCGCGCGAG
GAGGAGCCGC AGATCAGCGT GCCGATGGTC GACATCCGCA TCAATGCCGA CGGCCTGCAC
GGTCCCGACG CGGTCGAGCT GGTGACCAAG CCGCTGGAGG CCATCGTCAA GGGCATCGAC
GGCGTCGAGC ACGTCTACAG CCAGACCGAA GACGACCGCG TGATCGTCAC CGCTCGGTTT
CTGGTCGGCA CCAAGGCCGA GGATGCGATC CTGCGCGTCC ACGAGAAGAT CCGCGCCAAT
CTCGACCGGA TCCCGGTCGG CATCGCCGAG CCGCTGATCG TCGGCCGCGG CATCAACGAC
GTCGCCATCA CGGTGCTGAC GCTGTCGCCG AAGCCGGAGG CGGCCAGCCG CTGGACCGAC
AAGGACCTCT ATGAGCTCGC CGACAAGCTG CGCTCCGAAC TGATGAAGGT CGACAATGTC
GGCCTGACCT ACATCTCGGG CGGCGGCGCG CAGCAGATCC GGGTCGAGCC CGATCCGGAG
AAGCTGTCGT TGTACGGCGT GACGTTGCAG CAGCTCGTCG CCAAAGTGAA GGACGCCAAC
CGCTCGTTCC TCGCCGGCTC GGCGCGCGAC GGCGGCGGGA TGCGCAGCGT TTCCGCCGGC
CAGACGCTGA TGGGGATTCC CGACATCGGC CTGCTGTTGA TCGCCACCCG CGACAACCGC
CCGGTCTACG TCAAGGACGT CGCCTCGGTG ATCGTCGGAC CGAATGCCGC CGAGCACCGT
GTCTGGAACG ATGCGCGCAG CGGTGACGGC AATTGGGACC GCGTGCCCGC GGTCAGCGTC
GCGCTCGCCA AGCGCGCCGG CGCCAACGCC GTGGTGGCGT CGCACGACAT CAAGACGCGG
CTCGCCGCGC TCGAGGGCAC GCTGATTCCG AGCGACGTCG CCGTCACCGT GACGCGCGAC
TACGGCGAGA CCGCCAACGA GAAGGCCAAC GAACTGCTGC TGCATCTCGG CATCGCCACG
ATCTCGATCG TGGTACTGAT CGCGATCGCG ATCGGCTGGC GCGAGGCGGT GGTGACTGCC
GTGGTGATCC CGACCACGAT CCTGCTGACG CTCTTCGCCG CCAATCTGAT GGGCTACACC
ATCAACCGCG TCAGCCTGTT CGCGCTGATC TTCTCCATCG GCATCCTGGT CGACGACGCC
ATCGTGGTCG TCGAGAACAT CGCCCGGCAT TGGGGGATGA AGGACGGCCG GCCTCGGCTG
CAGGCCACCA TCGAGGCGGT GGCCGAGGTC GGCAATCCCA CCGTGATCGC GACGCTCACC
GTGGTCGCGG CCTTGTTGCC GATGCTGTTC GTGTCCGGGC TGATGGGCCC CTATATGGCG
CCGATCCCCG CCAATGCGTC GGCGGCAATG CTGTTCTCGT TCTTCGTCGC GATGGTGGTG
GCGCCGTGGC TGATGCTGAA GCTCGCGCCG CGCGCGGGCG CCGCTGTCGC CGCGCATGAT
GCGCATGACG AGGGCCGGCT CGGCCGGCTG TATCGCCGCA TCGCCTCGCC GATCGTCGCC
AGCAAGCGCG CGTCGTGGAT CTTCCTGCTC GGCGTCGGCG TCGCCACGCT GGCCTCGATG
GTGCTGTTCT ACACCAAGTC GGTGACGGTG AAGCTGCTGC CGTTCGACAA CAAGAGCGAG
ATCGCGGTGG TGCTCGACCT GCCGGAAGGC GCGACGGTGG AAGATACCGA GCGGACGCTG
TTCGCCGCCG CCGACATCGC CCGTGGTCTC CCTGAAATCA CCTCGGTGCA GAGCTACGCC
GGCACGCCGG CGCCGTACAA TTTCAACGGC CTGGTGCGCC AGTATTACTT GCGCGAACGC
CCCGAGCTCG GCGAATTGCA GGTCAATCTC GCCGCGCGCG GCGATCGTTC GCGCCCCAGT
CACGCCATCG CGCTCGATCT GCGCGAGCGG CTGAAGGCGC TGTCGGTCCC GGCCGGCACC
AGCCTCAAGG TCGTCGAAGT GCCGCCCGGC CCGCCGGTGA TGGCGACGCT GTTGGCCGAG
ATCTACGGCC CCGACGCCGC GACGCGGCGC GCGGTCACCG CGGAGGTGAA GAAGATCTTC
AAGGACGTGC CGTTCATCGT CGATATCGAC GATTCGATCG GCCAGCCGCG GCCGCGACTG
CGGCTGTCGA TCGATCAGGA CCGACTGGAG TTCTTCGGCG TCGAGCAGAA GGACGTCTAC
GACACCATCG CGACGCTGTT CGGCGGCACT TCGATCGGCT ACTCGCATCG CGGCGAGGAC
CGCAACCCGA TCGCCATCAA CGTCGCCCTG CCGAAGCGCG ACCTGGTCTG GAACGAGGCG
CTGGCCTCGA CCCCGGTGCC GGCCAACACG CTGCCGGGCG CCAAGACCGT CGTCGAACTC
GGCCAACTCG TGAAGGCGAC CCGCGAAGTC GGCTCGCCCT TGATCTTCCG CCGCGACGGC
CGCTTCGCCG ACATGGTGAT GGCTGAACTC GCGGGTAAGT TCGAGGCGCC GCTGTACGGC
ATTCTCGAGG TCGACAAGCG CATCGAGGCG CACGACTGGG GCAAGCTGCC GAAGCCGGCG
ATCAGCCTGC ACGGTCAGCC GTCCGACGAA TCCCGTCCGA CGCTGCTGTG GGACGGCGAA
TGGGAGATCA CCTGGGTGAC GTTCCGCGAC ATGGGCGCGG CGTTCGGCGC GGCGATCGTC
GGCATCTACG TGCTGGTGGT GGCCCAGTTC AAGAGCTTCA AGCTGCCGCT GGTGATCCTG
ACGCCGATCC CGCTGACGCT GATCGGCATC CTGATCGGCC ATTGGCTGCT CGGCGCGCCG
TTCACCGCCA CCTCGATGAT CGGTTTCATC GCGCTCGCCG GCATCATCGT GCGCAACTCG
ATCCTGCTGG TCGATTTCAT CCGCCATTCC GGCGGCGCGG GCAAAACCTT GCGCGAGGTC
GTGCTGCAGG CCGGCGCGGT GCGGTTCAAG CCGATCCTGC TCACCGCGCT GGCGGCGATG
ATCGGGGCGG CGACGATCCT GCTCGATCCG ATCTTCCAGG GGCTGGCGAT CTCGCTGCTG
TTCGGGCTCG CCTCGTCGAC GCTGCTGACG GTGCTGGTGA TTCCGGCGAT CTACATCGTG
CTGCGCGACA AATCGCCGAC TCCGCCCGCC GGTCCGGTGG CAAAGGGATA G
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| Protein sequence | MNLGISGRLT KATILSPLTP LFLLASLVVG LFALVAIPRE EEPQISVPMV DIRINADGLH
GPDAVELVTK PLEAIVKGID GVEHVYSQTE DDRVIVTARF LVGTKAEDAI LRVHEKIRAN
LDRIPVGIAE PLIVGRGIND VAITVLTLSP KPEAASRWTD KDLYELADKL RSELMKVDNV
GLTYISGGGA QQIRVEPDPE KLSLYGVTLQ QLVAKVKDAN RSFLAGSARD GGGMRSVSAG
QTLMGIPDIG LLLIATRDNR PVYVKDVASV IVGPNAAEHR VWNDARSGDG NWDRVPAVSV
ALAKRAGANA VVASHDIKTR LAALEGTLIP SDVAVTVTRD YGETANEKAN ELLLHLGIAT
ISIVVLIAIA IGWREAVVTA VVIPTTILLT LFAANLMGYT INRVSLFALI FSIGILVDDA
IVVVENIARH WGMKDGRPRL QATIEAVAEV GNPTVIATLT VVAALLPMLF VSGLMGPYMA
PIPANASAAM LFSFFVAMVV APWLMLKLAP RAGAAVAAHD AHDEGRLGRL YRRIASPIVA
SKRASWIFLL GVGVATLASM VLFYTKSVTV KLLPFDNKSE IAVVLDLPEG ATVEDTERTL
FAAADIARGL PEITSVQSYA GTPAPYNFNG LVRQYYLRER PELGELQVNL AARGDRSRPS
HAIALDLRER LKALSVPAGT SLKVVEVPPG PPVMATLLAE IYGPDAATRR AVTAEVKKIF
KDVPFIVDID DSIGQPRPRL RLSIDQDRLE FFGVEQKDVY DTIATLFGGT SIGYSHRGED
RNPIAINVAL PKRDLVWNEA LASTPVPANT LPGAKTVVEL GQLVKATREV GSPLIFRRDG
RFADMVMAEL AGKFEAPLYG ILEVDKRIEA HDWGKLPKPA ISLHGQPSDE SRPTLLWDGE
WEITWVTFRD MGAAFGAAIV GIYVLVVAQF KSFKLPLVIL TPIPLTLIGI LIGHWLLGAP
FTATSMIGFI ALAGIIVRNS ILLVDFIRHS GGAGKTLREV VLQAGAVRFK PILLTALAAM
IGAATILLDP IFQGLAISLL FGLASSTLLT VLVIPAIYIV LRDKSPTPPA GPVAKG
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