| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4164 |
|---|
| Symbol | |
|---|
| ID | 3911972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4735603 |
|---|
| End bp | 4736466 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637886068 |
|---|
| Product | prolipoprotein diacylglyceryl transferase |
|---|
| Protein accession | YP_487767 |
|---|
| Protein GI | 86751271 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
|---|
| TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.123051 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTT TCGCCATCGC CTTCCCCGTG TTCGATCCGG TCGCCGTCGC TGTCGGCCCG
TTCGAAATCC GCTGGTATGC GCTGGCCTAT ATCGCCGGCA TCCTGCTCGG CTGGCTGTAT
GCCCGGATGC TGCTGCAGCG TGAGCGGCTG TGGGGCGGGC CGGCGCCGAT CACGCCCGTC
CAGTTCGACG ACTTCATCCT GTGGGTGACG ATCGGCATCA TTCTCGGCGG CCGCACCGGC
TACGTGCTGT TCTACAATCT CGATTTCTTC ATCGCGAATC CGTCCGAAAT CTTCGTGCTG
TGGAAGGGCG GGATGTCGTT TCACGGCGGC TTCATGGGCT GCGTGGTCGC GGTGTTCCTG
TTCGGCTGGA AGCGCAATAT CTCGGTCGCC TCGCTCGGCG ACATCACCTG TGCGGTCGGG
CCGATCGGGC TTTTTCTCGG CAGGATCGCC AATTTCATCA ACGGTGAGTT GTGGGGGCGC
CCGGCGGATT CCACCGTGCC GTGGGCGATG GTGTTCCCCA ATGCCGGTCC GCTGCCGCGG
CATCCGAGCC AGCTCTATGA GGCCGGGCTC GAGGGCCTGG CGCTGTTCCT GATCCTGGCG
CTGATGATCC GCGCCGGCGC GTTGAAGCGG CCGGGCCTGA TCATCGGCGC GTTCCTCACC
TTCTACGGGC TCGGCCGCAT CACCGGCGAG TTCTTCCGCG AGCCCGATCC GCAGCTCGGC
TTCCGGTGGG GCGGCATGAC CATGGGCATG CTGCTGTCGG TGCCGATGGT GATCGCCGGC
ATCGTCGTGA TGTTGGCGGC GCGCCGTCGC GCGAGCACGC CGCCGCAGCC CGCCGGCGCA
AAACCCGGCG AGGCGGTGAA GTGA
|
|---|
| Protein sequence | MPFFAIAFPV FDPVAVAVGP FEIRWYALAY IAGILLGWLY ARMLLQRERL WGGPAPITPV
QFDDFILWVT IGIILGGRTG YVLFYNLDFF IANPSEIFVL WKGGMSFHGG FMGCVVAVFL
FGWKRNISVA SLGDITCAVG PIGLFLGRIA NFINGELWGR PADSTVPWAM VFPNAGPLPR
HPSQLYEAGL EGLALFLILA LMIRAGALKR PGLIIGAFLT FYGLGRITGE FFREPDPQLG
FRWGGMTMGM LLSVPMVIAG IVVMLAARRR ASTPPQPAGA KPGEAVK
|
|---|
| |