| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4118 |
|---|
| Symbol | |
|---|
| ID | 3911926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4690182 |
|---|
| End bp | 4690883 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637886022 |
|---|
| Product | flagellar hook capping protein |
|---|
| Protein accession | YP_487721 |
|---|
| Protein GI | 86751225 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1843] Flagellar hook capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCG CAGCCACCAC CGCGACGACG CCGTATTCGG CTCCCAACGC CAACTACACC
GCGACCGCGA CGTCGAGCTC GACCACCGGC ATCGCCGACA ATTTCCAGAC CTTCCTGACG
CTGCTGACGA CACAATTGCA GAACCAGAAT CCGCTGGAGC CGCTGGACAC CAACCAGTTC
ACCCAGCAGC TGGTGCAGTT CGCCGGCGTC GAGCAGCAGC TCAAGACCAA TGAAACGCTG
TCCTCGCTCC TGAAGATGCA GTCCACCGCA CAGACCACGC AGGCGATGAA CTTCATCGGC
GCCACCGCCG TGGTCGACGG CAGCAAATCG CACTACGACG GCAAGACCGC GGGTTGGACG
CTGTCCACCG ACAAGCCGGT GACGGCGCAG GTGTCGGTCC AGAGCTCGAC CGGGCAGACG
GTGTATTCCG GCAAATTCAC GCTCAACGCC GGCGCCAACC AGGGCTTCAC CTGGGACGGC
CGCGGCAATG ACGGGACGCA GTGGCCGGAG GGCGACTACA CGCTGTCGGT GGTCGCGACC
GACGCCGCCG GCCAGCCGGC GGCCGTCTCC ACCCAGATCC AGGGCACCAT CGATTCCGTC
GACCTGACCC AATCGCCACC GATGTTGACG ATCGGCCTGC AGACCTTCAC CCTCGACCAG
ATCAAGCGCG TGGTGAAACC GAGCACCGGC ACGACGACGT GA
|
|---|
| Protein sequence | MSAAATTATT PYSAPNANYT ATATSSSTTG IADNFQTFLT LLTTQLQNQN PLEPLDTNQF
TQQLVQFAGV EQQLKTNETL SSLLKMQSTA QTTQAMNFIG ATAVVDGSKS HYDGKTAGWT
LSTDKPVTAQ VSVQSSTGQT VYSGKFTLNA GANQGFTWDG RGNDGTQWPE GDYTLSVVAT
DAAGQPAAVS TQIQGTIDSV DLTQSPPMLT IGLQTFTLDQ IKRVVKPSTG TTT
|
|---|
| |