| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4062 |
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| Symbol | |
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| ID | 3911869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4633199 |
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| End bp | 4634794 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885966 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_487666 |
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| Protein GI | 86751170 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC AGGGTTGGGA CTACATCATC GTCGGCGCCG GCTCCGCGGG CTGCATCGTC
GCCAACCGGC TGTCGGCCGA TCCGGCCTGC CGCGTGCTGC TGCTCGAGGC CGGCGGCTCG
GATCGCAACA TCTGGCTGAA GCTGCCGGTC GGCTATTATC GCTCGATCTA CGACGACCGC
TTCTCGCGCA AATTCATCAC CGAGCCGAGC GACGTCACCG GCGGCCGCGC CATCGTCTGG
CCGCGCGGCC GCGTGCTCGG GGGCTCGTCG TCGATCAACG GGCTGATCTT CATCCGCGGC
GAGCCGGCCG GCTTCGACGA TTGGGAGCGG CTCGGCGCCA AAGGCTGGAG CTATCAGGAG
CTGCTGCCGT ATTTCCGGCG CTACGAGCGC TATCGCGGCG GCGACAGCCA GTATCACGGC
GGTTTCGGCG AGTTCGAAGT CTCCGATCTG CGCACCGGCA GCGAGGCCGC CGCCGCATGG
GTGCAGGCCG GCATCGAATT CGGCCTGCCG CGCAATCCGG ACTTCAACGC GGAGACGACT
TACGGCGTCG GCGCCTATCA GCTCGGCATC GGCCGGCGCT GGCGCTCGAG CTCGGCTTCC
GCTTTTCTGC ATCCGGTCAT GCACCGCACG AATCTGACGG TGATCACCCG GGCACACGCG
AGCCGCGTGC TGTTCGACGG CACCACCGCC ACCGGCGTCG AATGGATCAG GGACGGGCAA
CGGATCCAGG CGCGCGCCGA ACGTGAAGTA ATCCTCTCGG CCGGCGCGCT GCAGTCGCCG
CAATTGCTAC AGCTCTCCGG TATCGGCCCT GCGGCGCTGC TGCGCGGCCT CGGCATCGAA
ATCGTGGCCG ATGCGCCCGA GGTCGGGCGC AACCTGCAGG ATCATTATCA GGCGCGGATG
ATCGTGCGGC TGAAGCAGAA GCACTCGCTC AACGATCAGG TGCGCAGCCC GGTCGGGCTC
GCGAAGATGG GCCTGCAATG GCTGCTCGCC GGCAACGGGC CGCTCACCGC CGGCGCCGGC
CAGGTCGGCG GCGCCGCCTG CACGCGCTAT GCGAAGAACG GCCGCCCCGA CGTGCAGTTC
AACGTCATGC CGCTGTCGGT CGACAAGCCC GGCGAGCCGC TGCACAGCTA CTCGGGCTTC
ACCGCTTCGG TGTGGCAGTG CCACGCCGAA TCGCGGGGCC ATCTGGCGAT CCGTTCGACC
GACCCGTTCG AGCAGCCGAC CATCGTACCG AACTATTTCG AGCGCGAGAT CGATCGTAAC
ACCATCGTCG CCGGGCTCGA GATCCTGCGC GAGATCTATC GGCAGCCGTC GTTCCGCGAG
CGCTGGGACC TCGACGTGGT GCCGGGCGAG AACATCAACG ACCCTGCCGG GCTGTGGGAG
TTCGCCCGCA CCACCGGCGG CACGGTGTTC CATGCCTGCG GCACCTGCCG GATGGGTTCC
GACGACGGCG CGGTGGTCGA TCCGCGCCTG CGCGTGCGCG GCGTCGAGCG GCTGCGCGTG
GTCGACGCCT CGGTGATGCC ACTGATCACC TCGGCCAATA CCAACGCCGC CAGCCTGATG
ATCGGCGAGA AGGGCGCCGC CCTGATCGCC TCATGA
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| Protein sequence | MAAQGWDYII VGAGSAGCIV ANRLSADPAC RVLLLEAGGS DRNIWLKLPV GYYRSIYDDR
FSRKFITEPS DVTGGRAIVW PRGRVLGGSS SINGLIFIRG EPAGFDDWER LGAKGWSYQE
LLPYFRRYER YRGGDSQYHG GFGEFEVSDL RTGSEAAAAW VQAGIEFGLP RNPDFNAETT
YGVGAYQLGI GRRWRSSSAS AFLHPVMHRT NLTVITRAHA SRVLFDGTTA TGVEWIRDGQ
RIQARAEREV ILSAGALQSP QLLQLSGIGP AALLRGLGIE IVADAPEVGR NLQDHYQARM
IVRLKQKHSL NDQVRSPVGL AKMGLQWLLA GNGPLTAGAG QVGGAACTRY AKNGRPDVQF
NVMPLSVDKP GEPLHSYSGF TASVWQCHAE SRGHLAIRST DPFEQPTIVP NYFEREIDRN
TIVAGLEILR EIYRQPSFRE RWDLDVVPGE NINDPAGLWE FARTTGGTVF HACGTCRMGS
DDGAVVDPRL RVRGVERLRV VDASVMPLIT SANTNAASLM IGEKGAALIA S
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