| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4049 |
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| Symbol | |
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| ID | 3911856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4618620 |
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| End bp | 4620239 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885953 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_487653 |
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| Protein GI | 86751157 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.684503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC GCGACTTCCT GAAATCTGCC ACCGCCCTCG CTGCCGGAGC GATGGTGCCG
GCGCCCGCGA TCTGGTCCGC TGCGAAGGCG GACGCACGGT CGGAATCCCT GCTGGTGGTG
TCCGAAAGCG GCCCCAACAA CCTCGACATC CACGGCATCG GCACCAATGT GCCGGGCTAC
GAGGTGTCGT GGAATTGCTA CGACCGGCTG ATCACCCACG AGATGAAGGA AGGCCCCGGC
GGGGTTCCCT ATTACGACAA GGACAAGTTC AGGGGCGAAC TCGCCGAGGA CATGGTGGTC
GGCGACATGT CGGCGACCTT CAAGCTGAAG AAGAACGCCA CCTTCCAGGA CGGCACCCCG
GTCACCGCCA AGGACGTCAA ATGGTCGCTC GATCGCTCGG TCAGCGTCGG CGGCTTCCCG
ACCTTCCAGA TGAGCGCCGG CTCGCTGACC AAGCCCGAGC AGTTCGTCGT CGTCGACGAC
CACACCGTGC GGGTCGACTT TCTCCGCAAG GACAAGCTGA CGATCCCGGA TCTCGCGGTG
ATCGTGCCCT GCGTCGTCAA TTCCGAACTG GTGAAGAAGA ACGCCACCGA GAAGGATCCG
TGGGGCCTCG AATACACCAA GCAGAACACC GCCGGCTCCG GCGCCTACCG CGTGGTCAAG
TGGACCGCCG GCACCGAAGT GATCATGGAG CGCAACGACA AATGGGTCGG CGGCCCGCTG
CCGAAGATCA AGCGCGTGAT CTGGCGCATG GTGCCGCAGG CCGGCAACCG CCGCGCCCTG
CTGGAGCGCG GCGACGCCGA CATCTCCTAT GAGTTGCCGA ACCAGGACTT CGCCGAGATG
AAGCGCGACG GCAAGATCAA CGTGGTGTCG CTGCCGATCT CGAACGGCAT CCAGTATCTC
GGCATGAACG TCACCCAGCC GCCGTTCAAC AATCCCAAGG TGCGCGAGGC GGTGGCCTAT
GCGGTGCCGT ATCAGAAGAT CATCGACGCG GTGATGTTCG GCCTCGCCAA TCCGATGTTC
GGGGCGGCCG CCGACAAGGC GACCGAAGTG AAGTGGCCGC AGCCGACCAA GTACAATACC
GACATCGCCA AGGCCAAGGC GCTGATGGCG GAAGCCGGCT ACGCCGGCGG CTTCGACACC
ACGCTGTCGT TCGACCTCGG CTTCGCCGGC GTCAACGAGC CGATGTGCAT CCTGATCCAG
GAGAGTCTCG CGCAGATCGG CATCCGCTGC ACGATCAACA AGATCCCCGG CGCCAACTGG
CGCACCGAGT TGAACAAGAA GGTGCTGCCG CTCTACGTCA ACATCTTTTC GGGATGGCTC
GATTACCCGG AATACTTCTT CTACTGGTGC TACCGCTCCG GCAATTCGAT CTTCAACACC
ATGAACTACA ACTCGCCCGA TATGGACAAG CTGATCGAAG GCGCCCGCGT CGCCGCGGCG
GCCGGCGACA TGCCGACCTA CGACACCGAC GTCAAGGGCT TCGTCGATCT GGCCTTCAAG
GACATCCCGC GCGTGCCTTT GTATCAGCCC TATCTCAACG TCGCGATGCA GAAGAACATC
TCCGGCTTCG CCTACTGGTT CCACCGCCGG CTGGACTACC GGACGATGGT GAAGGGCTGA
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| Protein sequence | MKRRDFLKSA TALAAGAMVP APAIWSAAKA DARSESLLVV SESGPNNLDI HGIGTNVPGY
EVSWNCYDRL ITHEMKEGPG GVPYYDKDKF RGELAEDMVV GDMSATFKLK KNATFQDGTP
VTAKDVKWSL DRSVSVGGFP TFQMSAGSLT KPEQFVVVDD HTVRVDFLRK DKLTIPDLAV
IVPCVVNSEL VKKNATEKDP WGLEYTKQNT AGSGAYRVVK WTAGTEVIME RNDKWVGGPL
PKIKRVIWRM VPQAGNRRAL LERGDADISY ELPNQDFAEM KRDGKINVVS LPISNGIQYL
GMNVTQPPFN NPKVREAVAY AVPYQKIIDA VMFGLANPMF GAAADKATEV KWPQPTKYNT
DIAKAKALMA EAGYAGGFDT TLSFDLGFAG VNEPMCILIQ ESLAQIGIRC TINKIPGANW
RTELNKKVLP LYVNIFSGWL DYPEYFFYWC YRSGNSIFNT MNYNSPDMDK LIEGARVAAA
AGDMPTYDTD VKGFVDLAFK DIPRVPLYQP YLNVAMQKNI SGFAYWFHRR LDYRTMVKG
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