Gene RPB_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4048 
Symbol 
ID3911855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4617799 
End bp4618266 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content66% 
IMG OID637885952 
Producthypothetical protein 
Protein accessionYP_487652 
Protein GI86751156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.551805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACT GGATCATTGC ATTCACCGCC GCTCTCATCG TGGTAATCGG CTATGCGGCC 
GGGCCCGTCG GCGCTGTGAT TTCGCTGCTC GCGTTTGCGG GCTCGTTGTA CCTGATGTGG
GCTCGCAAGC TCGGCTTCCG CGGTGCCTGG ACGCGGTTCG GCCTCGATCG CTTCACCGCG
CCGTTCTGGA AGGGCGAGAA CTGGGAGCGC TTCAACGCGA TGTTCACCGA CAGCGAGAGC
GTCGTGAAGG CCGGCACCAT CGCCGTGGCC CTGATCGCGC TGTCGCTGAT CCTGCCGGCG
GGTCAGGTCG GTCTGATCGC GCTCGTCGTC GCCGCCTGGT ACGCGTTCGA GGTCTATCGC
AGCCATCGCC CACTGGTGCG CCCGACGGTG GCGATCGAGT CCAATCCGGT CGGCGACAAG
GTCATCTACG CGACGGCGCC GCGCAGCGAG CCCGCCACGA TGAACTGA
 
Protein sequence
MQYWIIAFTA ALIVVIGYAA GPVGAVISLL AFAGSLYLMW ARKLGFRGAW TRFGLDRFTA 
PFWKGENWER FNAMFTDSES VVKAGTIAVA LIALSLILPA GQVGLIALVV AAWYAFEVYR
SHRPLVRPTV AIESNPVGDK VIYATAPRSE PATMN