Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4040 |
Symbol | |
ID | 3911847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4610821 |
End bp | 4611654 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885944 |
Product | hypothetical protein |
Protein accession | YP_487644 |
Protein GI | 86751148 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.253336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGAG CATTGACAGT GTTTCTGGGG CTGAGCGCGG TGGCTGCCGT CGCGTATTTC ACGTTCAGCC ATTGGGCGAT CCGGCACGAG ACGCTGAGCT TCTACGACGA AGCGCGGAAG CGGCCGATCG CCGTCTACCT CGCGGTGCGA CGCGACGCCG AGATGAAGGC GGAGGCCGGT CTGTCGACGT TGCCGGTCGC CATCGTCAGC CACGGCAACA CCGTCAAGAA CACCGAATAT TCGTTCCTCG CCAACGTTCT CGCGGCGCGC GGCTATCTGG TCGCGAGCAT TCAGCACGAT CTGCCGACCG ACGCGCCGCT GATGACGCAT CAGGGCTCGC TCTATGTCGG GCGGCTGGCG GTGTACGAGC GCGGCGAAAA GAACATCTTC TTCGCCGTCA ACCAGCTCAA GAAGATCGTC CCCAGCGCCG ATTACGAGCA TCTCACGCTG GTCGGGCATT CCAACGGCGG CGATATTTCG ATGTTCTTCG CCCAGCAGCA CCCCGCATTG GTGCGGCGGG TGGTGACGCT GGACAATCTG CGGGTGCCGT TCGTAACGTC CGGCTTCGCC AAGATTCTGT CGTTCCGTTC CAAGGACCCG CACTTCAAGA CCGATCCCGG CGTGCTGCCC GATCCGAACG TCGCCAAACA GGCCGGCATC GAGATCGTCG ACACCGGCGC CCAGCACACC GAGATGAGCG ATCGCGGTCC GGACAGCGTC AAGGCGCGGA TCCAGTCGAC GCTCGACCAG TTCCTGTCGG AGGACGCCAA CAGCAGGATC GGCCCGGTCG ACACGAGGCG GCTGAATGCC GACCCGAGCG CGATGGGGCC GTAG
|
Protein sequence | MKRALTVFLG LSAVAAVAYF TFSHWAIRHE TLSFYDEARK RPIAVYLAVR RDAEMKAEAG LSTLPVAIVS HGNTVKNTEY SFLANVLAAR GYLVASIQHD LPTDAPLMTH QGSLYVGRLA VYERGEKNIF FAVNQLKKIV PSADYEHLTL VGHSNGGDIS MFFAQQHPAL VRRVVTLDNL RVPFVTSGFA KILSFRSKDP HFKTDPGVLP DPNVAKQAGI EIVDTGAQHT EMSDRGPDSV KARIQSTLDQ FLSEDANSRI GPVDTRRLNA DPSAMGP
|
| |