Gene RPB_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4040 
Symbol 
ID3911847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4610821 
End bp4611654 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content64% 
IMG OID637885944 
Producthypothetical protein 
Protein accessionYP_487644 
Protein GI86751148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.253336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG CATTGACAGT GTTTCTGGGG CTGAGCGCGG TGGCTGCCGT CGCGTATTTC 
ACGTTCAGCC ATTGGGCGAT CCGGCACGAG ACGCTGAGCT TCTACGACGA AGCGCGGAAG
CGGCCGATCG CCGTCTACCT CGCGGTGCGA CGCGACGCCG AGATGAAGGC GGAGGCCGGT
CTGTCGACGT TGCCGGTCGC CATCGTCAGC CACGGCAACA CCGTCAAGAA CACCGAATAT
TCGTTCCTCG CCAACGTTCT CGCGGCGCGC GGCTATCTGG TCGCGAGCAT TCAGCACGAT
CTGCCGACCG ACGCGCCGCT GATGACGCAT CAGGGCTCGC TCTATGTCGG GCGGCTGGCG
GTGTACGAGC GCGGCGAAAA GAACATCTTC TTCGCCGTCA ACCAGCTCAA GAAGATCGTC
CCCAGCGCCG ATTACGAGCA TCTCACGCTG GTCGGGCATT CCAACGGCGG CGATATTTCG
ATGTTCTTCG CCCAGCAGCA CCCCGCATTG GTGCGGCGGG TGGTGACGCT GGACAATCTG
CGGGTGCCGT TCGTAACGTC CGGCTTCGCC AAGATTCTGT CGTTCCGTTC CAAGGACCCG
CACTTCAAGA CCGATCCCGG CGTGCTGCCC GATCCGAACG TCGCCAAACA GGCCGGCATC
GAGATCGTCG ACACCGGCGC CCAGCACACC GAGATGAGCG ATCGCGGTCC GGACAGCGTC
AAGGCGCGGA TCCAGTCGAC GCTCGACCAG TTCCTGTCGG AGGACGCCAA CAGCAGGATC
GGCCCGGTCG ACACGAGGCG GCTGAATGCC GACCCGAGCG CGATGGGGCC GTAG
 
Protein sequence
MKRALTVFLG LSAVAAVAYF TFSHWAIRHE TLSFYDEARK RPIAVYLAVR RDAEMKAEAG 
LSTLPVAIVS HGNTVKNTEY SFLANVLAAR GYLVASIQHD LPTDAPLMTH QGSLYVGRLA
VYERGEKNIF FAVNQLKKIV PSADYEHLTL VGHSNGGDIS MFFAQQHPAL VRRVVTLDNL
RVPFVTSGFA KILSFRSKDP HFKTDPGVLP DPNVAKQAGI EIVDTGAQHT EMSDRGPDSV
KARIQSTLDQ FLSEDANSRI GPVDTRRLNA DPSAMGP