| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4020 |
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| Symbol | |
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| ID | 3911827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4588237 |
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| End bp | 4589847 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885924 |
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| Product | hypothetical protein |
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| Protein accession | YP_487624 |
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| Protein GI | 86751128 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.905898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.886685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG CCGCCAGGTC GACACTCGCG CGGCTGCTCG TCGCCCTCGT CGCGGTGATC
GCGATCGCCA CCGCCTTGTG GCAATTGCAT CGCGCCAGCG GCGACCTGAT CGTCACCCAT
GCGCGCGTCG GCCAGACGCC GGTGTCGGTG TTCCGCGAGC CGACCACCAC GCGCGCGCCG
GTGGTGGTGA TCGCGCACGG CTTCGCCGGC TCGCAACAAC TCATGCAGCC GTTCGCCCAG
ACGCTGGCGC GCAACGGTTA TATCGCGGTG ACGTTCGATT TCACCGGCCA CGGCCGCAAC
CCCGTGACGA TGGTCGGCGA CGTCGACGAG CCGACAAAAA TCACCGGCGT GCTGGTCGAC
GACCTCGCCC GGGTCACCGA CTACGCCCGC GCGCTGCCGC AAAGCGACGG CCGCGCCGCG
GTGCTCGGGC ATTCGATGGC GTCCGACATC GTCGTCGCCT ATGCGGTGGC GCATCCGGAG
ATCACCGCCA CCGTCGCGGT GTCGGTGTTC ACCCGCAAAT CGACGCCGAC CCTGCCGCAC
AATCTGCTGG TGATCGTCGG CGACTGGGAA CCGCAGATGC TGAAGGACGA GGGCCTCCGC
ATCGTCGATC AAGTCGCCGG CGGCGGGGCG GTGGCCGGGC GGAGCTATGG CAGCTTCGCC
GACGGCACCG CGCGGCGCGT GGCGTTCTCG TCCGGAGTCG AACATATCGG CGTGCTGTAC
AGCCAGGACA GCATGCGCGA ATCGCTGCAA TGGATGAACG AATCGTTCGG CCGGCAAAGC
GCGGGCTGGA TCGATCGCCG CCCGGTCTGG CTGGCGCTGC TGTTCGGCGG ATTGATCGCG
ATGGCCTGGC CGCTGTCGAA GCTGCTGCCG CAAGCGGCGC CGCTGCCGAT GGGAGCCAGT
CTGGCGTGGA AACCGTTGCT GATCGCCGCA ATCGTCCCCG CCGTGCTGAC GCCGCTGATC
CTCTGGAAGG CGCCGACCGA CTTCCTGACC ATCCTGCTCG GCGACTATCT GACGTTGCAC
TTTCTGCTGT ACGGCGCTTT GACCGCCGCG ATCCTGCTGC TGATCCGCCG GCGCGGCCGC
AAGGCGCATT CTCAGGCCCA TGCTTCCACG CATCACGCGC CCGGACTGGA GCGACTGGAG
TCGCTGCCCG ACCCCGCGCA TCCGCGCGTC GCAATCACGG CGCTGGTGAT CGCGTCGGTG
GCGGCGATCG CCTACAACAT CATCGGCTTC GGCGTGCCGC TCGACACTTA CGCATTCTCG
TTCATGCCGA TCGAACCGCG GCTGCATCTG ATCGCCGCGG TCGCCTGCGG CACGGTTCCG
TATTTTCTCA CCGCGGAATG GATGGCGCAT GGCACGGGCG CCAGACGCGG TGCCTATGCG
CTGGCGAAAT TCTGCTTCCT CGCCTCGCTC GCCGCCGCCG TCGCGCTCAA TCTGCAGAAG
CTGTTCTTCC TGATCATCAT CGTGCCGGCG ATCCTGCTGT TGTTCATCGC CTTCGGCGTG
ATCAGCAACT GGACCTACAA GGCGACCAAC CACCCCCTCC CCGGCGCGCT CGCCAATGCG
ATCCTGTTCG CCTGGGCGAT CGCGGTGACG TTCCCGATGG TGATCCGCTG A
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| Protein sequence | MTIAARSTLA RLLVALVAVI AIATALWQLH RASGDLIVTH ARVGQTPVSV FREPTTTRAP
VVVIAHGFAG SQQLMQPFAQ TLARNGYIAV TFDFTGHGRN PVTMVGDVDE PTKITGVLVD
DLARVTDYAR ALPQSDGRAA VLGHSMASDI VVAYAVAHPE ITATVAVSVF TRKSTPTLPH
NLLVIVGDWE PQMLKDEGLR IVDQVAGGGA VAGRSYGSFA DGTARRVAFS SGVEHIGVLY
SQDSMRESLQ WMNESFGRQS AGWIDRRPVW LALLFGGLIA MAWPLSKLLP QAAPLPMGAS
LAWKPLLIAA IVPAVLTPLI LWKAPTDFLT ILLGDYLTLH FLLYGALTAA ILLLIRRRGR
KAHSQAHAST HHAPGLERLE SLPDPAHPRV AITALVIASV AAIAYNIIGF GVPLDTYAFS
FMPIEPRLHL IAAVACGTVP YFLTAEWMAH GTGARRGAYA LAKFCFLASL AAAVALNLQK
LFFLIIIVPA ILLLFIAFGV ISNWTYKATN HPLPGALANA ILFAWAIAVT FPMVIR
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