| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4016 |
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| Symbol | bchD |
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| ID | 3911823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4582895 |
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| End bp | 4584655 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637885920 |
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| Product | magnesium chelatase subunit D |
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| Protein accession | YP_487620 |
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| Protein GI | 86751124 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.367457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCT CGCCAGCATG GTCCGATGCG GTGACCGCGG CGCAGTTGTT CGCGGTGGAT
CCGGTCGGCA CCGGCGGCGT GCTGCTGCGC TCGCGCGCCG GTCCGGTGCG CGACCGCTGG
CTGGCGACGC TGCGCGCCGC GCTGCCCCCT GAGCAGCCCT ATCGGAACTT GCCGCTGCAC
ATCGCCGATG GCCGCCTGCT CGGCGGCCTC GATCTGTCCG CGACGCTGCT CGCCGGCCGC
CCGGTCGCCG AGCGCGGATT GCTGGCGGAG GCCGATGGCG GCGTGCTGGT GGTGGCGATG
GCCGAGCGGA TGCAGTCCTC GACCAACGTG TATCTGACCG CCGCGATGGA CGCGCAGGAG
ACCGCGGTCG AGCGCGACGG CCTGTCGCTG CGGATGCCGG CGCGGTTCGG CGTGGTGGCG
CTCGACGAAG GCCTCGAGGA CGAGTTCGCG CCGGCCGGCC TGCGCGACCG GCTCGGCTTC
CATCTCGATC TCGATCAGTT CGCCTGGCGC GACACCGAGG ATTTCCCGGT CCAGCTCGAC
GACATCATGG CGGCGCGTGC GCGCCTGTCC GCGATCAAGG TCGAGAGCGC GCAGATCGAG
GCGATCTGCA CGGCGGCCGC CGCGCTCGGC ATCATCTCGC TGCGCGCGCC GCTGCTGGCG
ATCCGCGCGG CGCGGGCGAG TGCGGCGCTG TTCGATCGTG TCGTCATCGA GCAGGACGAC
CTCACGCTCG CCGCGCGTCT GGTGCTGGCG CCGCGCGCCA CCGTGTTTCC GCAAGCCGAT
CAGCCCGACC AGGCCGAGCC GCCGCCGCCG GAGCCGCCGC CGGAGGACAA TTCGGAAGAG
AATAACGATC AGGAACAGCA GACGCCGGAC ATCGACAAGG CGCTCGACGA GGTGATCCTC
GCCGCGGTGA AGGCCGCGAT GCCGCCCGGC GTGCTCGAAG CGCTGCGCGC CTCCGCCGGC
CGCGCCCGCG CACGTTCGGC GGGCAAGGCC GGCCAGTTGC AGAAGTCGAA GAAGCGCGGG
CGTCCCACGG GCAGCGTGCG CGGCGAATTG CGCGACGGCT CCAAGCTCAA CGTCATCGAG
ACGCTGCGCG CCGCCGCACC CTGGCAGCCG CTGCGCCGGC GCCAGGCCGC GGGCCGCTCC
GGTAGCGCGC CGCGCATTCT GGTCGAGAAG GACGATTTCC GGATCGCGCG CTTCAAGCAG
CGCACCGAGA CCATCACCAT CTTCGTGGTC GATGCTTCCG GCTCCGCGGC GCTACATCGG
CTCGCCGAAG CCAAGGGCGC GGTCGAGTTG TTACTTGCGG ATTGCTACGT GCGCCGCGAT
CAGGTGGCGA TGATCGCGTT CCGCGGGAGC ATCGCCGAGA TCCTGCTGCC GCCGACGCGG
TCGCTGGCGC GCGCCAAGCG CAGCCTCGCC GGCCTGCCCG GCGGCGGCGG CACGCCGCTC
GCGGCCGGGC TCGACGCCGC CTTCATGCTG GCCGACTCGA TCAAGCGCAA GGGCCAGACC
CCGACCGTGA TCGTGCTCAC CGACGGCCGC GCCAACATCG CCCGCGACGG CGCGCCGGGC
CGGCCGCAGG CCGAGGAAGA CGCCAAGGCC TCGGCGCGGC AATTCCGCGT CGCCGGCATC
AATGCGGTGG TGATCGACAT GTCGCCGCGG CCGGGGCCGC AGGCCGAAGC CTTCGCCAAG
GAAATGGACG CGCGCTATCT GCCGATGCCC TATGCGGACG CCAATGTGCT GGCGAAGGCG
GTCACTGCGG CGACGGGCTG A
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| Protein sequence | MSISPAWSDA VTAAQLFAVD PVGTGGVLLR SRAGPVRDRW LATLRAALPP EQPYRNLPLH
IADGRLLGGL DLSATLLAGR PVAERGLLAE ADGGVLVVAM AERMQSSTNV YLTAAMDAQE
TAVERDGLSL RMPARFGVVA LDEGLEDEFA PAGLRDRLGF HLDLDQFAWR DTEDFPVQLD
DIMAARARLS AIKVESAQIE AICTAAAALG IISLRAPLLA IRAARASAAL FDRVVIEQDD
LTLAARLVLA PRATVFPQAD QPDQAEPPPP EPPPEDNSEE NNDQEQQTPD IDKALDEVIL
AAVKAAMPPG VLEALRASAG RARARSAGKA GQLQKSKKRG RPTGSVRGEL RDGSKLNVIE
TLRAAAPWQP LRRRQAAGRS GSAPRILVEK DDFRIARFKQ RTETITIFVV DASGSAALHR
LAEAKGAVEL LLADCYVRRD QVAMIAFRGS IAEILLPPTR SLARAKRSLA GLPGGGGTPL
AAGLDAAFML ADSIKRKGQT PTVIVLTDGR ANIARDGAPG RPQAEEDAKA SARQFRVAGI
NAVVIDMSPR PGPQAEAFAK EMDARYLPMP YADANVLAKA VTAATG
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