| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3999 |
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| Symbol | |
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| ID | 3911806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4564612 |
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| End bp | 4566063 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885903 |
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| Product | chlorophyllide reductase subunit Z |
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| Protein accession | YP_487603 |
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| Protein GI | 86751107 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit
[TIGR02014] chlorophyllide reductase subunit Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.464812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00738947 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGTCC TCGACCATGA TCGCGCCGGC GGCTATTGGG GCGCCGTCTA TGCCTTCACC
GCGGTGAAGG GCCTGCAGGT GATCATCGAC GGCCCGGTCG GCTGTGAAAA CCTGCCGGTG
ACCTCGGTGC TGCACTACAC CGACGCGCTG CCGCCGCACG AACTGCCGAT CGTCGTGACC
GGCCTCGGCG AAGAAGAGCT CGGCAAGCTC GGCACCGAAG GCGCCATGAA GCGCGCGCAT
CGCACGCTCG ACCCGTTCAT GCCCGCGGTC GTGGTGACCG GTTCGATCGC CGAGATGATC
GGCGGCGGCG TGACGCCCGA AGGCACCGGC ATCAAGCGCT TCCTGCCGCG CACCATCGAC
GAAGACCAGT GGCAGAGCGC CGATCGCGCG ATCTCTTGGC TGTGGAAAGA ATACGGCCCG
AAGAAGATTC CGGAGCGCAA GCCGCTGTCG CCGGACGTCA AGCCGCGGGT CAACATCATC
GGCCCGATCT ACGGCACGTT CAACATGCCG TCCGATCTCG CGGAAATCCG CCGCCTGATC
GAGGGCATCG GCGCCGAAGT CAACATGGTG TTTCCGCTCG GGACGCATCT GTCCGATATC
CCGAAGCTGG TGAACGCCGA CGTCAACGTC TGCATGTATC GCGAGTTCGG CCGGCTGCTG
TGCGAAACCT TGGAGCGGCC GTATCTCCAG GCGCCGATCG GACTGCATTC GACGACGCGC
TTCCTGCGCA AGCTCGGCGA ACTCACCGGT CTCGATCCGG AGCCGTTCAT CGAGCGCGAG
AAGAACACCA CGATCAAGCC GTTGTGGGAC CTTTGGCGCT CGGTGACGCA GGACTTCTTC
GGCACCGCCA GCTTCGCGAT CGTCGCGACC GACACGTACG CCCGCGGTGT GCGGCATTTC
CTCGAAGAGG AAATGGGCCT GCCGTGCGCC TTCGCGATGT CGCGCCGGGC CGGCGTCAAG
CCGGACAACG ACGCGGTGCG GACCGCGATC CGGCAGACCC CGCCGTTGAT CATGTTCGGA
AGCTACAACG AAAGAATGTA CCTCGCCGAA TCCGGCTCAC GCGCGATCTA CATCCCGGCG
TCGTTTCCCG GCGCGGTGAT CCGCCGCCAT CTCGGCACGC CCTTCATGGG ATACTCCGGC
GCGACCTATC TGGTGCAGGA GGTCTGCAAC GCGCTGTTCG ACGCGCTGTT CAACATCCTG
CCGCTCGGCA GTGATCTCGA TCGGGTCGAT CCGACCCCGG CGCGCCGTCA CGAAGAGCTG
CTCTGGAGTG ACGAGGCCAA GGCGCTGCTC GACGAGGTTC TCGAAGCTCA TCCGGTGCTG
GTGCGAATTT CCGCGGCGAA GCGCTTGCGC GACGCAGCCG AGAATAGCGC GCGCCGCGCC
GGCCAGGAGC GTGTGACCGA AGAATTCGTC ACGAAAGCGC GTGCAGCGCT GATGGACGGG
CAGACTGTGT AA
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| Protein sequence | MLVLDHDRAG GYWGAVYAFT AVKGLQVIID GPVGCENLPV TSVLHYTDAL PPHELPIVVT
GLGEEELGKL GTEGAMKRAH RTLDPFMPAV VVTGSIAEMI GGGVTPEGTG IKRFLPRTID
EDQWQSADRA ISWLWKEYGP KKIPERKPLS PDVKPRVNII GPIYGTFNMP SDLAEIRRLI
EGIGAEVNMV FPLGTHLSDI PKLVNADVNV CMYREFGRLL CETLERPYLQ APIGLHSTTR
FLRKLGELTG LDPEPFIERE KNTTIKPLWD LWRSVTQDFF GTASFAIVAT DTYARGVRHF
LEEEMGLPCA FAMSRRAGVK PDNDAVRTAI RQTPPLIMFG SYNERMYLAE SGSRAIYIPA
SFPGAVIRRH LGTPFMGYSG ATYLVQEVCN ALFDALFNIL PLGSDLDRVD PTPARRHEEL
LWSDEAKALL DEVLEAHPVL VRISAAKRLR DAAENSARRA GQERVTEEFV TKARAALMDG
QTV
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