| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3983 |
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| Symbol | |
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| ID | 3911790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4549700 |
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| End bp | 4550593 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885887 |
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| Product | cobalamin B12-binding |
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| Protein accession | YP_487587 |
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| Protein GI | 86751091 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.110014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC GGAACGAGCT TTCGCTTCCG CCAGCCACCG ACACCGAGCA GACCCAGTTA
CCTTTAAGAC CGCAGGATTT ATCGCCCCCA GAGCCGCTCT GGCGGTTTCG GCCTTTAATC
GGTGCCAGAG GCATTGTCCG TTCGATGCGC ACCCAGATAC TCCCCCAGGT TGGCTACGCC
CTGCGCTCCA TGTCCTTTCC CGCGCTTTCC GCACCCACCG ATCCGTCTGC ACCATTCGAG
GTGCAGCAGT TCACGCTTCT GGTGCTCGGT TTAGACGAGA GCGCGGCCTT GGCCTATGTC
GAGTCTCTTA GCGCGCGAGG GGCCTCCACT GATTTGATCT TCCTCAACCT GCTGGCGCCT
GCGGCGCGGC GACTGGGAGA GATGTGGGAG GACGACACGA CCGACTTCGC CAATGTGACT
CTCGGGGTCA GTCGCCTTCA GCGCATCCTT CGCCAGATCG GCGAGAACCA TGGCCGGACC
GAAGCTCTGC AACGCAGCGG CGCTGTCCTG CTCACCACCA TCCCCGGCGA ACAACACAGC
TTCGGCCTTG CGATGGTCGC GGAGTTTTTC CGCAACGACG GCTGGGACAT CTGCACCGGC
CCTTTCGCCA CGCATCGTGA CATGACGACG CTGGTCGCGG AGCGCTGGTT CGACGTGATC
GGCTTCTCCG TGACCAGCGA CAGGCGGTTG AACCAGTTGA AGAGCAATAT CGTCGACATT
CGTCGCGATT CCCGCAATCG CCGCATCGGC GTGATCGTCG GCGGGCCAAT GCTGGTCGAT
CGACCGGAGT TGGTGGGCTC GCTCGGCGCC GACGGGATGG CAATCGACGG TGCGCGCGCG
CCGCAGCTCG CCCGAGAACT GGTGATTGCC TTGAAAGGCG AAGATTCACT GTGA
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| Protein sequence | MTNRNELSLP PATDTEQTQL PLRPQDLSPP EPLWRFRPLI GARGIVRSMR TQILPQVGYA
LRSMSFPALS APTDPSAPFE VQQFTLLVLG LDESAALAYV ESLSARGAST DLIFLNLLAP
AARRLGEMWE DDTTDFANVT LGVSRLQRIL RQIGENHGRT EALQRSGAVL LTTIPGEQHS
FGLAMVAEFF RNDGWDICTG PFATHRDMTT LVAERWFDVI GFSVTSDRRL NQLKSNIVDI
RRDSRNRRIG VIVGGPMLVD RPELVGSLGA DGMAIDGARA PQLARELVIA LKGEDSL
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