| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3976 |
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| Symbol | |
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| ID | 3911783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4539177 |
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| End bp | 4540610 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885880 |
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| Product | LhaA protein |
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| Protein accession | YP_487580 |
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| Protein GI | 86751084 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.27032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.197279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA TGGCGGCGAC ATTGGCGAAA GGCTGGATGC GTCTCGGGAC GCGTTTCCTG
CCGTTCGCCG ACGCGGCGAC GAAAGAGCTC CCGCTCGGCC GTCTGCTGCG CCTGTCGCTG
TTTCAGGTCT CTGTCGGCGC TTCGGTGGTG CTGCTCAACG GCACGCTGAA CCGGGTGATG
ATCGTCGAGC TCGGCGTCTC GACGCTGCTG GTCTCGCTGA TGGTGTCGCT GCCACTGATC
TTCGCGCCGT TCCGCGTGCT GATCGGATTC AAGTCGGACA ACCACCGCTC GGTGCTGGGC
TGGCGTCGTG TGCCTTATAT CTGGATGGGC ACGATGCTGC AGTTCGGCGG CTTCGCGATC
ATGCCATTCG CGCTGCTGGT GCTGTCCGGC GGCGGCGAGT ATCCGGCGGT CTATGGTCAG
ATCGGCGCTG CTCTGGCGTT CTTGCTTGTC GGCGCCGGGC TGCACACGAC GCAGACCGCC
GGCCTTGCGC TCGCCACCGA TCTGGCGCCG GAAGAATCGC GGCCGCGGGT CGTCGCGTTC
CTTTACGTGA TGCTGCTCGT CGGGATGACC GGCAGCGCGC TGCTGTTCAG CGAACTGCTC
CGCGACTTCA GCGAGCTTCA ACTGATCCAG GTGATTCAGG GCGTCGCCGT CGCCCAGTTG
CTGCTCAACA TCGCTGCGCT GTGGAAGCAG GAGGCGCGCA ATCCCGCGCT CACCTCGGCG
ACCCGTCCGC GGCCGCAGTT CAATCAATCT TGGGCGCGGT TCCGCGCTGC CGGCGGTTCG
AACCGGATGC TGGTCGCGGT CGCGCTCGGT ACCGCGGGAT TCTCCATGCA GGACATCCTG
CTGGAGCCTT ACGGCGCCGA AGTGCTGAAG CTCTCCGTCG GTCAGACCAC GGCGCTGACC
GCGTTTTTCG CGCTCGGCAC GCTGGCCGGC TTCGGCCTCG CGGCGCGGAC GCTCGGACGC
GGCAGCGATC CGTATCGGAT CGCCGGCTTC GGCGCGCTGA TCGGCATCTT CGCGTTTGCG
GCCGTCGCGC TGGCGGCGCC GGCGCAATCG GTTGTTCTGT TCCGGATCGG CACCGCGCTG
ATCGGGCTGG GCGGAGGCCT GTTCGCGGCC GGCACGCTGA CCGCAGCGAT GCAGATCGGT
TCCGACAGCG AACCCGGGCT CGCGCTCGGT GCCTGGGGCG CGGTGCAGGC CACCGCGGCG
GGCGGCGGCA TCCTGCTCGG CGGCGGTCTG CGCGATTTGT TCGCTTCGCT CGCCGACAGC
GGCATGCTCG GCGCCGTGCT GTCGGGGCCC GCGATCGGTT ACGGCTTCGT CTACAACATC
GAGATCGCGT TGCTGTTCGC AACGTTGGTT GCGGTAGGTC CTCTCGTGCG GGTCGCACGG
CCGAACTACG CGCAGCCTTC ATCCAAGTTC GGCCTAGCCG AATTTCCAGG TTAA
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| Protein sequence | MSQMAATLAK GWMRLGTRFL PFADAATKEL PLGRLLRLSL FQVSVGASVV LLNGTLNRVM
IVELGVSTLL VSLMVSLPLI FAPFRVLIGF KSDNHRSVLG WRRVPYIWMG TMLQFGGFAI
MPFALLVLSG GGEYPAVYGQ IGAALAFLLV GAGLHTTQTA GLALATDLAP EESRPRVVAF
LYVMLLVGMT GSALLFSELL RDFSELQLIQ VIQGVAVAQL LLNIAALWKQ EARNPALTSA
TRPRPQFNQS WARFRAAGGS NRMLVAVALG TAGFSMQDIL LEPYGAEVLK LSVGQTTALT
AFFALGTLAG FGLAARTLGR GSDPYRIAGF GALIGIFAFA AVALAAPAQS VVLFRIGTAL
IGLGGGLFAA GTLTAAMQIG SDSEPGLALG AWGAVQATAA GGGILLGGGL RDLFASLADS
GMLGAVLSGP AIGYGFVYNI EIALLFATLV AVGPLVRVAR PNYAQPSSKF GLAEFPG
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