| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3937 |
|---|
| Symbol | |
|---|
| ID | 3911744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4492439 |
|---|
| End bp | 4493296 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637885841 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_487541 |
|---|
| Protein GI | 86751045 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3777] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG CGCTCGACAT CGATCACCTG CGGCAATGGA TCGGCCGCAG CGAACAGGCC
GCCGACACCG TCACGGCGCA GCTCGTCCGC GGCCTGCGCG CGACGCTGTT TCTCGACATC
GGCAAGCCCG CGGCGGGCGA CGCGGCACCT TTCACCGCGC ATTGGTGCCT CGGCCAGCCG
GTGTATCCGA TGGACATGCT CGGCCCCGAC GGCCACCCGA CCCGCGGCGG CTTCCTGCCG
CCGGTGCCGC TGCCGCGCCG GATGTGGGCG GGCGGCGAGC TGACCTTCAT CGATCCGCTG
AAGGTCGGCG ACGAGGTGAC GCGAACCTCG ACGATCGGCG ACGTGACGAT CAAGCAGGGC
TCGACCGGCA CGCTGTGCTT CGTCACCGTC CATCACGAGA TCACCACCCC GCGCGGCATC
GCGATCCGCG ACCGCCAGGA CATCGTCTAT CGCGACGTGC CGCCGCCCTC CGCCACACCG
GCGGCCCCGG CCAAGCCCGC CACCGCGCCG CCGGCCGCGC AGCATCGCGA GAGCCATCTC
GCCGATCCGG TGCTGCTGTT TCGTTATTCC GCGCTGACCT TCAACGGCCA CCGCATCCAT
TACGACCGCG ACTACGTCAC CAAGGTCGAG GGCTATCCCG GCCTGATCGT CCACGGCCCG
ATGCAGGCCG CACTGCTGGT CGAATTCGCC GCGAAGCTGA AAGGCGCAGC GCCGAAGACG
TTCTCCTATC GCGGCGTGCA GCCGCTGTTC GACGGCGCGG AATTTTCGGT CAACGCCAAC
GAGACGGCGA CCGGCCTCGA ATTGTGGACC GCGAATGCCG ACGGCGTGCC GACGATGAAG
GGCACCGCGA GCTGGTAG
|
|---|
| Protein sequence | MTDALDIDHL RQWIGRSEQA ADTVTAQLVR GLRATLFLDI GKPAAGDAAP FTAHWCLGQP
VYPMDMLGPD GHPTRGGFLP PVPLPRRMWA GGELTFIDPL KVGDEVTRTS TIGDVTIKQG
STGTLCFVTV HHEITTPRGI AIRDRQDIVY RDVPPPSATP AAPAKPATAP PAAQHRESHL
ADPVLLFRYS ALTFNGHRIH YDRDYVTKVE GYPGLIVHGP MQAALLVEFA AKLKGAAPKT
FSYRGVQPLF DGAEFSVNAN ETATGLELWT ANADGVPTMK GTASW
|
|---|
| |