Gene RPB_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3925 
Symbol 
ID3911730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4477234 
End bp4478466 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content71% 
IMG OID637885827 
Producthypothetical protein 
Protein accessionYP_487529 
Protein GI86751033 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00761065 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.565732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAC AGATCATGTA TCTGGCGATC GGCTTTCTGG TGGCGATGCT GCTGGCGCTG 
ATGATCGCGC CGCTGGTGCA TCATCGCGCG GTGCGGCTGA CGACCAAGCG GCTGGAGGCG
GCGACGCCGC TGTCGATGGC CGAGATCCAG GCCGACAAGG ACCAGCTCCG CGCCGAATTC
GCGATGTCGG CGCGACGGCT GGAAATGAGC GTCGACCAGC TCAAGCACAA GACCACCAGC
CAGCTCGCCG AACTCGGGCG CAAGAGCGAC GCGGTCAACC GCCTCAAGGT CGAGCTCGCC
GAAAAGAACG AGGCGATCTT CACGCTGGAG GCGCGCGAGA AGGCGGTGCA GGAACAGCTC
CGCGCCACCG AGGCGGATTT CGCCGCCAAG ACCCAGGCGC TGCGCGGCGC CGAGACGGCG
CTGACCGAGA AGCAGGCCGA GCTGGCGCAG ATCAACGCCG AACTGGCGGA CCGCTCGATG
CTCGCCGACA CGCGGCAGAT CGAACTGGTG GCGGTGCGCA CCCAGATCGA GGAGCTACGC
GCCCGCGTCG GCGACGCCGA GCGGGAATTC GCCGCGACGC AGACCCGGCT CGAAGCGCAG
CGCGGTGAAT CCGCCAACGC GACCCGCGAG CTCGAGGACG CCCGCGCGCG CGTCGACAAT
CTCAGCCAGC GCGTCGCCGA TCTCGACCGG CAATTGCTGG CGCAGGTCAA GGAGGCCGAG
ATGCTCGGCA GCCGCGTCGC CGCGCTCGAG GCCGAGAATG CCGAGCTGCG CGCCGCCGCC
AAGAGCACCG GCAAGGCTGC TGCGGCCGCG CCCGAGCTCG CCCGGCTGCG CGACGAGAAG
GCCGCGCTCG AAGAACAGTT GCGTCTCGCC CGCGACGAGC GCGCGCAGGC GCAGCGCGAA
CTGGCGGCGA TCCAGCAGCA GACCGAGAAC ACCTGGGCGA CCGAGCGGAT GGAGAACGCG
CTGCTGCGCG AGCGCATCAA CGACATCGCC GCCGAAGTCG CCAGGCTGGC GATCACGCTG
GAGGGCCCGG ATTCGCCGAT CGAGGCGATT CTGGCGAGCC AGCCCGCGCC CGCGCCCACC
GCCCCGTCGT CCAGAGCGAC CCCGCCGGCC GCGCCGGCCC GCGCCAACGG CGCCGCCGCA
ACGCCCGCCG CCCCGGCGGT CACAGGCGGC ACGCTCGCCG AACGCATCCG CGCGCTGCAA
TCCCACGCCT CGCGCGCCCG ACAGATCGGC TGA
 
Protein sequence
MVEQIMYLAI GFLVAMLLAL MIAPLVHHRA VRLTTKRLEA ATPLSMAEIQ ADKDQLRAEF 
AMSARRLEMS VDQLKHKTTS QLAELGRKSD AVNRLKVELA EKNEAIFTLE AREKAVQEQL
RATEADFAAK TQALRGAETA LTEKQAELAQ INAELADRSM LADTRQIELV AVRTQIEELR
ARVGDAEREF AATQTRLEAQ RGESANATRE LEDARARVDN LSQRVADLDR QLLAQVKEAE
MLGSRVAALE AENAELRAAA KSTGKAAAAA PELARLRDEK AALEEQLRLA RDERAQAQRE
LAAIQQQTEN TWATERMENA LLRERINDIA AEVARLAITL EGPDSPIEAI LASQPAPAPT
APSSRATPPA APARANGAAA TPAAPAVTGG TLAERIRALQ SHASRARQIG