| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3905 |
|---|
| Symbol | |
|---|
| ID | 3911710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4456912 |
|---|
| End bp | 4458162 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637885807 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_487509 |
|---|
| Protein GI | 86751013 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.187616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAACGC CTGCACAAAA GACCGGCACA ACGCCGGCAT TCATGCTCGA CTCGCGCCAG
GCCTGGATCA GGCTGGCGCT GGCGCTCGTC ATCGGCTCGA TCGGCAGCGT CGGGATGTGG
TCGGTGGTGG TGGTGCTGCC GGTGGTGCAG ACCGACTACG GCGCGACCCG CGCTGCGGCG
TCGCTGGCCT TCACTTTGGC GATGCTCGGC TTCGGCCTCG GCGGGGTGGC GACCGGCAAG
CTCACCGACC GTTTCGGCAT CGTCGCGGCG ATCGGCAGCG GCGTCGGGCT GATCGGGCTC
GGCTATCTCG GCGCCGGTCT GTCGACCGCG CTGTGGCAGT TCAATCTGAT GCATTTCGTG
ATCGGCGCCG GCGCCTCGGC GACGTTCGGC CCGCTGATGG CGGAGGCCTC GCACTGGTTT
CTGCGCTATC GCGGCGTCGC GGTGTCGATC GCCGCCACCG GTAATTATCT CGGCGGCACG
ATATGGCCGC CGCTGGTGAA TTGGGCGACG CAGACCTACG GCTGGCGCGC CACCCACGTG
GCGATCGGGG CGTTCTGCGT GGTGTCGATG GCGCTGGTGC TGGCGCTGCT GCGGGCGCGG
ATGGGCGGCC ATGTGGTGGC CGCGCACACC GCGGCCCCGC CGCCGAAGAT CGACCTGCAG
CTCGGCACCA ACACGCTGAC GGCGCTGCTG TGCATGGCCG CGATCGCCTG CTGCGTGGCG
ATGGCGATGC CGCAGGTCCA TATCGTGGCG TATTGCGGCG ACCTCGGCTA CGGCGTCGCG
CGCGGCGCCG AGATGCTGTC GCTGATGCTG GCCTGCGGCA TCATCAGCCG GATCGGCTCC
GGCTTCCTCG CCGACCGCAT CGGCGGCATC GCGACGCTGC TGATCGGCGC GGTGGCGCAG
GGCGCAGCGT TGCTGTTCTA TCTGTTCTTC GACAGCCTGG TGTCGCTCTA CGTGATCTCG
GCGATGTTCG GCCTGTTCCA GGGCGGCATC GTGCCGGCCT ATGCGATCAT CGTGCGCGAG
GCGATGCCGG CGCACGAAGC CGCCACCCGT GTCGGCATTG TGATCATGGC CTCGGTGGTC
GGGATGTCGC TCGGCGGCTG GATCTCCGGC CTGATCTTCG ACGCCACCGG CTCCTACGCC
GCCGCCTTCC TCAACGGCAT CGGCTGGAAC GCCCTCAACG TCGCCATCAT GGCCGCGCTG
CTGCTGCGCG CCAGGCGGCG CGGCGGCGGC TCACGGGTGG CGATGGCGTG A
|
|---|
| Protein sequence | METPAQKTGT TPAFMLDSRQ AWIRLALALV IGSIGSVGMW SVVVVLPVVQ TDYGATRAAA
SLAFTLAMLG FGLGGVATGK LTDRFGIVAA IGSGVGLIGL GYLGAGLSTA LWQFNLMHFV
IGAGASATFG PLMAEASHWF LRYRGVAVSI AATGNYLGGT IWPPLVNWAT QTYGWRATHV
AIGAFCVVSM ALVLALLRAR MGGHVVAAHT AAPPPKIDLQ LGTNTLTALL CMAAIACCVA
MAMPQVHIVA YCGDLGYGVA RGAEMLSLML ACGIISRIGS GFLADRIGGI ATLLIGAVAQ
GAALLFYLFF DSLVSLYVIS AMFGLFQGGI VPAYAIIVRE AMPAHEAATR VGIVIMASVV
GMSLGGWISG LIFDATGSYA AAFLNGIGWN ALNVAIMAAL LLRARRRGGG SRVAMA
|
|---|
| |