| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3887 |
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| Symbol | |
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| ID | 3911691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4440740 |
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| End bp | 4441438 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885788 |
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| Product | transglutaminase-like |
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| Protein accession | YP_487491 |
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| Protein GI | 86750995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0611971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA CCAACGACAT CGACGCCTCC GAACGCGCGG TCTGCCTCGC ACCGGCGGAC
TACATCGACA GCGACCACCC CGAGGTGCGG GCGCTGGCGG CGCAGACGAC CGCCGGCGCC
GCGACGCCGG ACGACAAGCT CCGCGCGCTG TACCTCGCGG TGCGCGACGG CGTCCGCTAC
GACCCCTACG TCGATTTCAG AAGCGCCGAG GTGTTCCGCG GCTCCAGCGT GCTGCGGGCG
CAGCGCGGCT ATTGCGTCGG CAAGGCGGCG GCGTTCGCGG CGCTGTGCCG CGCCTCCGGC
ATTCCGGCGC GGGTGCGCTT CGCCGATGTG CGCAACCATC TGGCGACCGA GAACCTGACC
AAATCGATGG GTACCGATCT GTTCGCCTGG CACGGCTACA CCGAATGCTG GAACGCCGGC
CGCTGGGTCA AGGCGTCGCC GACGTTCAAT CTCACGCTGT GCCAGAAGCT CGGCGTCGCA
CCGCTGGATT TCGACGGCCG CACCGACTCC GTGATGCAGG CATTCGACAC CAAAGACGCG
CGCTTCATGG AATACGTCCG CGACCACGGC GCGTATTTCG ACGTGCCGGT GAAGTTCCTG
CAGGCCGAAA TGTTCGCGCA ATACCCCCAC CTCGTCCGCG AAGGCGGCGT GCGCGGCGAC
ATGGAGCAGG AAGCGGAGCG GGAGCGGGCG AAGGCGTAG
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| Protein sequence | MADTNDIDAS ERAVCLAPAD YIDSDHPEVR ALAAQTTAGA ATPDDKLRAL YLAVRDGVRY
DPYVDFRSAE VFRGSSVLRA QRGYCVGKAA AFAALCRASG IPARVRFADV RNHLATENLT
KSMGTDLFAW HGYTECWNAG RWVKASPTFN LTLCQKLGVA PLDFDGRTDS VMQAFDTKDA
RFMEYVRDHG AYFDVPVKFL QAEMFAQYPH LVREGGVRGD MEQEAERERA KA
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