| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3848 |
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| Symbol | |
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| ID | 3911652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4401078 |
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| End bp | 4401839 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885749 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_487452 |
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| Protein GI | 86750956 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAC TGTTCGACGT CAGCAACGAA GTCATCCTCG TCACCGGCGC CTCGCAAGGG
TTGGGGCGGC AGTTCGCGCG CGTGCTCGCC GAGCGCGGCG CCGCCGTCGT GCTCGCGGCG
CGGCAGACCG ACAAGCTGAA AAGCCTCGAA CAGGAGATCA CGGGCAACGG CGGCCGCGCC
GTCGCGGTGC AGATGGACGT CACCGATCTG GCCTCGATGG CGAGCGCGCT CGACCAGGGC
GAGGCGGCGC TCGGCCCGAT CACTGTGCTG ATCAACAATG CCGGCGTCGC CACCGAAAAG
CTCGCGGTCG ACACCAGCGA AGCCGATTGG GACAAGGTGA TCGGCGCCAA TCTCAAGGGC
GCGTACTTCC TCGCGACGGA GGTCGCGCGT CGGATGATCG CGCGACAGCA GGGCGGCAAC
ATCGTCAACA TCGCCTCGGT GCTCGGCGAG AGCGTGCTGA AATTCGTTTC GCCTTATGCG
ATCTCGAAAG CCGGCATCAT CCAAGCGACC AAGGCGCTGG CGCTCGAACT CGCCAGCTCG
CGCATCCGCG TCAACGCGCT GGCGCCGGGC TATATCGACA CCGACATCAA CCACGCGCTG
TGGTCGACGC CGGCCGGCGA GAAGCTCGTC AAAGGCATCC CCCAGCGCCG CGTCGGCCAC
GAGTCCGATC TCGACGGCGC GATTCTGCTA CTGGCCTCGA ACGCGTCGCG CTACATGACG
GGGAGCGTTG TGACGGTGGA TGGCGGGTTC TTGCTGGGGT AG
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| Protein sequence | MDQLFDVSNE VILVTGASQG LGRQFARVLA ERGAAVVLAA RQTDKLKSLE QEITGNGGRA
VAVQMDVTDL ASMASALDQG EAALGPITVL INNAGVATEK LAVDTSEADW DKVIGANLKG
AYFLATEVAR RMIARQQGGN IVNIASVLGE SVLKFVSPYA ISKAGIIQAT KALALELASS
RIRVNALAPG YIDTDINHAL WSTPAGEKLV KGIPQRRVGH ESDLDGAILL LASNASRYMT
GSVVTVDGGF LLG
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