| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3814 |
|---|
| Symbol | |
|---|
| ID | 3911617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4352087 |
|---|
| End bp | 4354753 |
|---|
| Gene Length | 2667 bp |
|---|
| Protein Length | 888 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637885715 |
|---|
| Product | flagellin |
|---|
| Protein accession | YP_487419 |
|---|
| Protein GI | 86750923 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTA TCGTTCTCTC GAATGCCGTC CGCCAGAACC TCTCGTCGCT TCAGGCCACG
GCAGACTTGC TCGCCACCAC CCAGAGCCGG CTCTCGTCCG GTAAGAAGGT GAACTCGGCG
CTCGACAATC CGACCAACTT CTTCACCGCC GCCTCGCTCG ACGCCCGCGC CAGCGACATC
AACAACCTGC TCGACGGCAT CAGCAGCGGC GTGCAGATCC TGCAGGCCGC CAACACCGGT
ATCACTTCGC TGACGAAGCT CGTCGACAGC GCCAAGTCGA TCGCCAACCA GGCCCTGCAG
ACGACCTCGG GCTATGCCAC GAAGTCGAAC GTGTCCGCCA CCATCTCCGG CGCCACCGCC
GAGGATATCC GCGGCACCCA GAGCTTCGAC AATGCGGTTG CGACCGGCAA CGTGATCTTC
GACGGCACCA CCGGCGGCAC CACGGCTGCG GCCGGCACCG ATACGCTCGG TGGCGCGATC
GTCAGCATCG CGGCTTCGGC GGCTGTGACC GTCCTCGGTG CGGTCGACGC GACGGCGACC
GGCGCCGTGC TCTCGGTCGG CACCGCCGCC GCGACCGCGG CCGGCACCAA CCTGATCAGC
GAACTGACCA ACGGTTCGAC CGTGACGGCG ACCGGCCCTG CCGCGGGTGA CTCGATCACC
GTCAACGGCA AGACCATCAC CTTCACGACC GCCGGCGCGT CCAGCAAGGA CTCCTCGGGC
AACTACACGA TCGGTCTCGA CCAGACCGTC AACTCGCTGC TCGACACCAT CGACACCGTC
AACGGCAACA CCGGCCTGTC CTCGGCCGTT ACCGCCGGCC GGCTCGAACT GCACTCGGGC
ACCAACAGCC CGCTGACCGT TGGTGATAAC GCCGGTGGCG CCGTTCTGGC CAAGCTCGGC
CTGACCGCGC AGACCGTCGA TACCGCTGCC GCCACCGCGT CGGCGAACAT CTCGGCGAGC
ACGCAGCTGT TCAACACCCA TGGTGGCCTG ACCACCACGG CGATCGCCGA CGGCACGACC
TTGTCGGTCA ACGGCAAGAC CATCACCTTC AAGACCGCCG ACGCGCCGCA GGGCAACAAC
ATCCCGACCG GCACCGGCGT CCTCGGCCGC ATCGGCACCG ACGGCAACGG CAACTCGACG
ATCTATCTCG GCGACCAGAC CAAGTTCACC AACGCGACGG TGGGCGATCT GTTGACCGCG
ATCGATCTCG CGAACGGCGT CAAGGCGGCG TCGATCTCGT CGGGTGTCGC GACCATCAGC
ACCAACTCCG GCCAGACGGC TTCCGCCGTC GCCGCCGGCA TCACCACCAT CCAGAGCTCG
ACCGGTGGCG ATCTGAACGT CACGGCCTTC ACCGACCTGT TCAAGAACCT CGGCCTGACC
ACTTCGAGTG GTACTGGTCC GCTGACCCTG ACCAAGCAGC GCACCACCAG CGGCACCACG
ATGGGCACGC TGATCGCCGA CGGCTCGACC TTGAACGTGA ACGGTAAGAC CATCACCTTC
AAGAACGCCG CGGTTCCGAC CGCGTCGTCG AGCCACACCG GCATCTCCGG CAACGTCGAA
ACCGACGGCA GCGGCAATTC GACCGTGTAC CTGCAGAAGG GTACGCTCGA TGACGTGCTG
AAGGCGATCG ACCTCGCCAC CGGCGTCCGC GTCGCCACGC TCGGGATCTC CGGCGCGACG
ATTGCGACCG CCAATGGCTC CGCCAACTCG TCGATCACCA GCGGTTCGCT GAAGCTGTCG
ACCGGCCTCG CGTCGGATCT GACCATCAAC GGCACCGGCA ATGCGCTGGC CGCCCTCGGC
CTCACCGGCC CGAGCGGGAC CTCGACCTCG TTCACCGCGA CCCGCGGCGT TGCCGCCGGC
AGCCTGAACG GCAAGAGCTT GACCTTCTCC TCCTTCAATG GCGGTTCGGC GGTCAATGTC
ACGCTCGGCG ATGGCAGCAA CGGTACCGTC AAGTCGCTGG CCCAGCTCAA CGTCGCGCTG
GCTGCCAACA ACCTGACGGC GTCGATCGAC AACGCCTCCG GCAAGCTGAC GATCGCAGCG
TCGAACGACT ACGCCTCCCG CACGCTGGGC GGCGCTGACG GCGGCGTGCT CGGCGGCACT
CTGGCCTCGC AGTTGACCTT CACCGTGCCG ACCGCACCGG TGGCCGACGT CAACGCCCAG
AACACCCGCG CCGGCCTGGT CAAGCAGTTC AACGACGTGC TCGACCAGAT CAAGACCACC
GCGCAGGACT CTTCGTTCAA CGGCGTCAAC CTGCTGAACG GCGACAACCT GAAGTTGGTG
TTCAACGAAA CCGGCAAGTC CACGATCTCG ATCCAGGGCG TGACCTTCAA CCCGACCGGC
CTCGGCCTGT CGACCCTGGC CTCGGGCACG GACTTCATCG ACAACAACGC CACCAACTCG
GTGTTGACCA AGCTGAGTGC CGCCTCGACC GCGCTGCGGT CGCAGTCGTC CGCTTTCGGT
TCGAACCTGT CGATCGTGCA GGCCCGTCAG GACTTCTCGA AGAGCCTGAT CAACGTGCTG
CAGACCGGCT CGTCCAACCT GACGCTGGCC GACACCAACG AAGAAGCGGC GAACAGCCAG
GCGCTGACGA CCCGTCAGTC GATCGCGGTC TCGGCGCTGT CGCTGGCCAA CCAGTCGCAG
CAGAGCGTGC TCCAGCTGCT GCGCTAA
|
|---|
| Protein sequence | MSGIVLSNAV RQNLSSLQAT ADLLATTQSR LSSGKKVNSA LDNPTNFFTA ASLDARASDI
NNLLDGISSG VQILQAANTG ITSLTKLVDS AKSIANQALQ TTSGYATKSN VSATISGATA
EDIRGTQSFD NAVATGNVIF DGTTGGTTAA AGTDTLGGAI VSIAASAAVT VLGAVDATAT
GAVLSVGTAA ATAAGTNLIS ELTNGSTVTA TGPAAGDSIT VNGKTITFTT AGASSKDSSG
NYTIGLDQTV NSLLDTIDTV NGNTGLSSAV TAGRLELHSG TNSPLTVGDN AGGAVLAKLG
LTAQTVDTAA ATASANISAS TQLFNTHGGL TTTAIADGTT LSVNGKTITF KTADAPQGNN
IPTGTGVLGR IGTDGNGNST IYLGDQTKFT NATVGDLLTA IDLANGVKAA SISSGVATIS
TNSGQTASAV AAGITTIQSS TGGDLNVTAF TDLFKNLGLT TSSGTGPLTL TKQRTTSGTT
MGTLIADGST LNVNGKTITF KNAAVPTASS SHTGISGNVE TDGSGNSTVY LQKGTLDDVL
KAIDLATGVR VATLGISGAT IATANGSANS SITSGSLKLS TGLASDLTIN GTGNALAALG
LTGPSGTSTS FTATRGVAAG SLNGKSLTFS SFNGGSAVNV TLGDGSNGTV KSLAQLNVAL
AANNLTASID NASGKLTIAA SNDYASRTLG GADGGVLGGT LASQLTFTVP TAPVADVNAQ
NTRAGLVKQF NDVLDQIKTT AQDSSFNGVN LLNGDNLKLV FNETGKSTIS IQGVTFNPTG
LGLSTLASGT DFIDNNATNS VLTKLSAAST ALRSQSSAFG SNLSIVQARQ DFSKSLINVL
QTGSSNLTLA DTNEEAANSQ ALTTRQSIAV SALSLANQSQ QSVLQLLR
|
|---|
| |