| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3813 |
|---|
| Symbol | |
|---|
| ID | 3911616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4350968 |
|---|
| End bp | 4351900 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637885714 |
|---|
| Product | methyltransferase FkbM |
|---|
| Protein accession | YP_487418 |
|---|
| Protein GI | 86750922 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.931416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CCGCCCCGGT ATCAGGTAGC AACGATTTGT CGCAGGCCGT CGTCGCGCCT
CGCGCGCCGG CCGCCGAAGA CGTTCTCGCC GCGATCATCG CTGCGTTGCC GGAGCTCGCG
CATCACCATG CGCCGGGCGG GGCGGCGTAT CAGGCGCTCG CCGCCGCGGC CCGCCAGGCG
GTGGTGACGC TGTTCGCGCA GGGCGGCAAG GACGTGGCGT TCGGCCCGTT CGGGCCGATC
AGCTTCCCGT ATCATGCGAT GGGGGCGGTC GATTCGCTCG ACCTGTTCGG CCTCGACGAG
CTGATCCTGT TCGCGTTTTA TTGGCAGAAC CGCGGCGTCT ACCGGAAGAC CGCCGACATC
GGCGGCAATA TCGGCCTGCA CAGCCTGGTG ATGGCGCGCT GCGACTTCGA GGTGCAGAGC
TACGAGCCAG ATCCCGAGCA CATCGCGCTG TTCAAGGCCA ACATGGCCGC CAACGGCGTC
AGCACGGTGA CGGTGCACGA GGCGGCGGTG TCGGCCGAGG CCGGCCAGGC GGAATTCCTG
CGGCTGCGCG GCAATACCAC CGGCAGCCAT CTCGCCGGCG CCAAGAGCGA TCCCTACGGC
CAGATCGACC GCTTCGCCGT CCGGCTCGAG GCGTTTGCCG CGATCGCCGC ACAGGTCGAT
TTCGCCAAGA TCGACGCCGA GGGGCACGAG GCGGTGATCA TCACCTCGCT GCCGGCCGAG
CGCTGGGACG GCCTCGACGT GATGCTGGAG ATCGGCAGCG ACGCCAATGC CGCGGCGATC
TTCGACTACG CCGCGAACGC GGGCGTGCAT CTGTTCACGC AGAAGACCGG CTGGCGCAAG
GCGGCCAAGA TTGCCGACCT GCCGACCTCG TACAAGCAGG GCAGCGCCTT TCTCACCCGC
AAGCACGCGA TGCCGGGCCT GCCGCCGACC TAG
|
|---|
| Protein sequence | MSQTAPVSGS NDLSQAVVAP RAPAAEDVLA AIIAALPELA HHHAPGGAAY QALAAAARQA
VVTLFAQGGK DVAFGPFGPI SFPYHAMGAV DSLDLFGLDE LILFAFYWQN RGVYRKTADI
GGNIGLHSLV MARCDFEVQS YEPDPEHIAL FKANMAANGV STVTVHEAAV SAEAGQAEFL
RLRGNTTGSH LAGAKSDPYG QIDRFAVRLE AFAAIAAQVD FAKIDAEGHE AVIITSLPAE
RWDGLDVMLE IGSDANAAAI FDYAANAGVH LFTQKTGWRK AAKIADLPTS YKQGSAFLTR
KHAMPGLPPT
|
|---|
| |