| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3812 |
|---|
| Symbol | |
|---|
| ID | 3911615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4350063 |
|---|
| End bp | 4350749 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637885713 |
|---|
| Product | sugar isomerase (SIS) |
|---|
| Protein accession | YP_487417 |
|---|
| Protein GI | 86750921 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0279] Phosphoheptose isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.671592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGT CGCGCAAGAC GAAGACCCGG GAGCCGCTCT CCCCAGAATC GTCGGGTGAT
ATCCACGCGG ATGTCGCCCC GAGCCCGCTG GTCTCCAAGG CGCAGCTGCT CGGCTATTTC
GACTTCCTCC GTGACACGCT CGCCGCCACC CAGGTCTCCG ATCGCGAAGG CCGGACCTTC
GGTCCGGAGG TCGCGGCTTC GCTGGTGATG GCCTGGGCGC GCGAGGCCCA TGCCGACGGC
CGCAAGCTGA TCTTCATCGG CAATGGCGGC AGCGCCGCGA TCGCCAGTCA CATGGCGACC
GATTATTCCA AGAACGGCGG CATGCGCGCG CTGTGCCTGA ACGACGGCGC GATGCTGACC
TGCCTCGGCA ATGACTACGG CTACGAGCAG GTGTTCGCCA AGCAGATCGA GCTGTTCGCG
CAGGACGGCG ACCTGCTGAT CGCGATCTCG AGCTCGGGCC GCTCGCCGAA CATCCTCAAC
GCGGTGGCGG TGGCGGAGCA GCGCGGCTGC CGAATCGTGA CGCTGAGCGG CTTCTCCGCC
GACAACCCGC TGCGCGGCCA GGGCGATATC AATTTCTATC TCGCTTCGGA GCAATACGGC
TTCGTGGAGA TCGGCCATCT GACGCTGTGC CACGCCATCC TCGATTTCGC CTGCGGCCAG
CGCGTGCCGC TGCCGGCCGC CCCCTGA
|
|---|
| Protein sequence | MMKSRKTKTR EPLSPESSGD IHADVAPSPL VSKAQLLGYF DFLRDTLAAT QVSDREGRTF
GPEVAASLVM AWAREAHADG RKLIFIGNGG SAAIASHMAT DYSKNGGMRA LCLNDGAMLT
CLGNDYGYEQ VFAKQIELFA QDGDLLIAIS SSGRSPNILN AVAVAEQRGC RIVTLSGFSA
DNPLRGQGDI NFYLASEQYG FVEIGHLTLC HAILDFACGQ RVPLPAAP
|
|---|
| |