Gene RPB_3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3775 
SymbolfliE 
ID3911578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4310565 
End bp4310870 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content67% 
IMG OID637885676 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_487380 
Protein GI86750884 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0512013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCAC CGATTTCCGC AGCCAATGCC TATGCGAGCC TCGCCCGGCT CGCCAATCCC 
GGCGGTGCCG GCAAGCCGAC AGACAACGGC CCGTCGTTCG GCGCGCTGGT CAAGGACGCG
ATGGGCAGCG TCCTCGACGC CGGCCGCAAG TCCGACGCCC AGACCGTGGC GATGGCCAAC
GGCAAGTCGA ACGTGATGGA CGTGGTCACT GCGGTCGCCG AGACCGACGT CGCGGTGTCG
ACGCTGGTGT CGGTGCGCGA TCGGGTGATC CAGTCCTACG AGGAAATCCT CCGGATGCAG
ATCTGA
 
Protein sequence
MASPISAANA YASLARLANP GGAGKPTDNG PSFGALVKDA MGSVLDAGRK SDAQTVAMAN 
GKSNVMDVVT AVAETDVAVS TLVSVRDRVI QSYEEILRMQ I