Gene RPB_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3769 
Symbol 
ID3911572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4303433 
End bp4304413 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content67% 
IMG OID637885670 
ProductBeta-lactamase-like 
Protein accessionYP_487374 
Protein GI86750878 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAC TGTCCCGCCG TAGCTTCGCC AGTGGCCTTC TCGGAGGGAG CCTCCTGGGA 
GGCGGCCTGA TCGGTGGCGG TCTGGCGCCA GTCCAGGCCA AGACCCAGGC TGCTGCGACC
GCGCCGGTCA GCGTGACTCC GCTGGCGCAG ATCAAGATCG GCCGCTTCAC CGTGACGGCG
CTGACCGACG GCTATGCGGA CATGCCCTAC ACCTTCTTCC CCGGCCGCTC GGCCGACCAG
GTCGAGCAGG CCGCGGTGGC GCAGCACACG GCGCGAGCGA GCGGTGTGCG GTTTCTGTTC
AACCAGTACC TGGTGGAAGA CGGCGAGCGC CGCATTCTGA TCGATGCCGG ACCGGCCGGA
TCGATCGGGC AGACCGGCGC GCTGCCGCAG GCGCTCGGCG CCCTCGGCCT GCGGCGCGAC
CAGATCGACG CAGTGATCGT GACGCATATG CATCAGGATC ACATGGGCGG ACTGATCGTC
GACGGTCGGA TGAACTATCC CAAGGCGGAG CTCTATATCG ATCGCCGCGA CGTCAAACAC
TGGACCGACC CGGCGAAGGC GAACGGCGCA CCGGATTATC TGCAGACCAG CTTCCGCATG
GCGGGCGAGG TCGTGCGCCT CTACCCGAAA CTGCAGGCGA TCGACGGCGA GCGTGAGATC
GTGCGCGGCG TCTCGATCGT CGATCTGACG GGACATACGC CGGGCCATAT CGGGGTGCGC
ATCGAGGACG GCGGCCAAAG CCTGATCATG GTCTCCGATA TGATTTTTCC GGTGGTGCAT
CCGGTGGCGA CGGACGTGTT CTTCCTGTTC GAGCAGGACC GCGCCGCGGC CCAGGCGATG
CGGGATCGCT TCTTTCCGCG TGCCGCGTCC GAAGGCGCGC TGATCGCCGC GACCCATATG
CCGTTCCCGG GGCTCGGCCG CATCGTGGCC GACCGGGGGC AATTGCGCTG GCAGGTGGCC
GACTGGGCGT TGCAGCTCTG A
 
Protein sequence
MPQLSRRSFA SGLLGGSLLG GGLIGGGLAP VQAKTQAAAT APVSVTPLAQ IKIGRFTVTA 
LTDGYADMPY TFFPGRSADQ VEQAAVAQHT ARASGVRFLF NQYLVEDGER RILIDAGPAG
SIGQTGALPQ ALGALGLRRD QIDAVIVTHM HQDHMGGLIV DGRMNYPKAE LYIDRRDVKH
WTDPAKANGA PDYLQTSFRM AGEVVRLYPK LQAIDGEREI VRGVSIVDLT GHTPGHIGVR
IEDGGQSLIM VSDMIFPVVH PVATDVFFLF EQDRAAAQAM RDRFFPRAAS EGALIAATHM
PFPGLGRIVA DRGQLRWQVA DWALQL