| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3700 |
|---|
| Symbol | |
|---|
| ID | 3911502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4238464 |
|---|
| End bp | 4239531 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637885602 |
|---|
| Product | aromatic amino acid beta-eliminating lyase/threonine aldolase |
|---|
| Protein accession | YP_487306 |
|---|
| Protein GI | 86750810 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2008] Threonine aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACA CCCCTGCCCC GCCCGATCCG AACGCGCCGC CCGTCCGGAT CAATCTTCTC
TCCGACACCC AGACGCGCCC CACGCCGGCG ATGCGCGAGG CGATGGCGCG GGCCGCGGTC
GGCGACGAGC AGACCGGCGA CGATCCGACC GTCAACGCGC TGAACGAACG GGTCGCCGCA
CTGCTCGGCA AGGAAGCCGC GGTGTTCCTG CCGTCCGGCA CGATGTGCAA CGTCACCGCG
ACGCTCGCCA CCTGCCGCCC CGGCGACGAG ATCATCGCGC ATCGCACCGC GCACATCCTG
TCGCGCGAGG GCGGCGCGCA TGCGGCGCTC GGCGGTTTCC AGATCACCGG CCTCGACGGC
GACGACGGAC AGTTCTCGCT CGATGCGTTC CGCGCCGCAC TGCATCCGCG CTCGCGCTAC
GAGCCGCCGC AGACCATGGT CAGCGTCGAG CAGACCGCCA ATATCGGCGG CGGCACGATC
TGGCCGCAGG CCACGCTCGA CGCCATCGCG GCGGCCGGCA AGGAAGCCGG GCTCGCCACC
CATATGGACG GCGCAAGGCT GATGAACGCG GCGGTCGCCA CCAGCATCGC GGCGCACGAG
ATGGCGGCGG GCTGGGATTC GGCGTGGATC GATTTCAGCA AGGGCCTCGG CGCGCCGGTC
GGCGCATCGC TCGCCGGTTC ACGCGCCTTC ATCGACGAGG TCTGGCGCTG GAAGCAGCGG
CTCGGCGGTT CGATGCGGCA GGCCGGAATC ATCGCCGCCG CCTGCCACTA CGCGCTCGAT
CATCACGTCG AACGCCTGGC GGAGGATCAC GCCAACGCCC GCGCGCTGGC CGCAGGGCTG
GCGCAGATCG CCGGCGTCGA TGTGCAGCAG CCGCACACCA ATCTGGTGTT CTTCCGGCCC
GACGGCGCGG GCGTTGCCGG CGACGCGATG GTCGCCGAGC TGCGGCAGCG CGGCGTGCTG
CTGGCGATGA TGGACGGCCG GATCCGCGCC TGCACCCATC TCGACGTCAG CGCCGCGATG
ATCGACGAGA CGCTGGCGCT GGTGCGCGAG ATCGTGCGCA AGGCCTGA
|
|---|
| Protein sequence | MAYTPAPPDP NAPPVRINLL SDTQTRPTPA MREAMARAAV GDEQTGDDPT VNALNERVAA
LLGKEAAVFL PSGTMCNVTA TLATCRPGDE IIAHRTAHIL SREGGAHAAL GGFQITGLDG
DDGQFSLDAF RAALHPRSRY EPPQTMVSVE QTANIGGGTI WPQATLDAIA AAGKEAGLAT
HMDGARLMNA AVATSIAAHE MAAGWDSAWI DFSKGLGAPV GASLAGSRAF IDEVWRWKQR
LGGSMRQAGI IAAACHYALD HHVERLAEDH ANARALAAGL AQIAGVDVQQ PHTNLVFFRP
DGAGVAGDAM VAELRQRGVL LAMMDGRIRA CTHLDVSAAM IDETLALVRE IVRKA
|
|---|
| |