Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3655 |
Symbol | |
ID | 3911457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4195855 |
End bp | 4196520 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637885557 |
Product | SAM binding protein |
Protein accession | YP_487261 |
Protein GI | 86750765 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.664514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.343483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGCAT TCTCTGACCC GCAGGCTGTT GCCCGCTACG CTGAAAACTC GCCGCGTATG GTGCCCGGCT TCGCTGACAT GCAGCGCATG GCTATGCTCC TGCTCGCGGA ACGCGCTCCG TCAGATGCGC AGGTGCTTGT ACTCGGCGCC GGGGGCGGCC TCGAACTCAA AATTTTTGCC GAAGCACAGC CTGAGTGGTC GTTCGTCGGG GTCGATCCCG CCGCTGCAAT GCTCGACCTT GCGCGGATAA CCCTCGGCGA CCTCGCCGGT CGCACGCAAT TTCATGAAGG CTTTATCGAA AGTGCGCCAG AAGGCCCATT TGATGGTGCA ACCTGTATCC TAACCCTGCA CTTCATCGAA CGTCAGGAGC GGCTGCGCAC CCTCAAAGAG GTGAAGCGAC GTTTGAAGCC AGGTGCTCCT TTCATCGCTG CGCATTACAG CATCCCGGAA GGCGAGCTTG ACCTGTGGCT GTCCCGATAT GCTGCCTTTT CGATTACGTC AGGTATCGAT CCTGCGCAGG CGAATGCCGC ACGTGCAGGG ATCGCCGAGC GTCTGCCGAT TCTCTCTCCC GCGGACGACG AACAGTTGCT GCGGGAGGCG GGCTTTCGTG GGATCAGCCT CTTCTATGCT GGCTTCGCTT TCAGAGGCTG GGTCTCTTAC GCCTAG
|
Protein sequence | MNAFSDPQAV ARYAENSPRM VPGFADMQRM AMLLLAERAP SDAQVLVLGA GGGLELKIFA EAQPEWSFVG VDPAAAMLDL ARITLGDLAG RTQFHEGFIE SAPEGPFDGA TCILTLHFIE RQERLRTLKE VKRRLKPGAP FIAAHYSIPE GELDLWLSRY AAFSITSGID PAQANAARAG IAERLPILSP ADDEQLLREA GFRGISLFYA GFAFRGWVSY A
|
| |