Gene RPB_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3655 
Symbol 
ID3911457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4195855 
End bp4196520 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID637885557 
ProductSAM binding protein 
Protein accessionYP_487261 
Protein GI86750765 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.664514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.343483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT TCTCTGACCC GCAGGCTGTT GCCCGCTACG CTGAAAACTC GCCGCGTATG 
GTGCCCGGCT TCGCTGACAT GCAGCGCATG GCTATGCTCC TGCTCGCGGA ACGCGCTCCG
TCAGATGCGC AGGTGCTTGT ACTCGGCGCC GGGGGCGGCC TCGAACTCAA AATTTTTGCC
GAAGCACAGC CTGAGTGGTC GTTCGTCGGG GTCGATCCCG CCGCTGCAAT GCTCGACCTT
GCGCGGATAA CCCTCGGCGA CCTCGCCGGT CGCACGCAAT TTCATGAAGG CTTTATCGAA
AGTGCGCCAG AAGGCCCATT TGATGGTGCA ACCTGTATCC TAACCCTGCA CTTCATCGAA
CGTCAGGAGC GGCTGCGCAC CCTCAAAGAG GTGAAGCGAC GTTTGAAGCC AGGTGCTCCT
TTCATCGCTG CGCATTACAG CATCCCGGAA GGCGAGCTTG ACCTGTGGCT GTCCCGATAT
GCTGCCTTTT CGATTACGTC AGGTATCGAT CCTGCGCAGG CGAATGCCGC ACGTGCAGGG
ATCGCCGAGC GTCTGCCGAT TCTCTCTCCC GCGGACGACG AACAGTTGCT GCGGGAGGCG
GGCTTTCGTG GGATCAGCCT CTTCTATGCT GGCTTCGCTT TCAGAGGCTG GGTCTCTTAC
GCCTAG
 
Protein sequence
MNAFSDPQAV ARYAENSPRM VPGFADMQRM AMLLLAERAP SDAQVLVLGA GGGLELKIFA 
EAQPEWSFVG VDPAAAMLDL ARITLGDLAG RTQFHEGFIE SAPEGPFDGA TCILTLHFIE
RQERLRTLKE VKRRLKPGAP FIAAHYSIPE GELDLWLSRY AAFSITSGID PAQANAARAG
IAERLPILSP ADDEQLLREA GFRGISLFYA GFAFRGWVSY A