Gene RPB_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3625 
Symbol 
ID3911427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4160689 
End bp4161498 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID637885527 
Producthypothetical protein 
Protein accessionYP_487231 
Protein GI86750735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.330686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACT GGTTTGCGGC TTGTGCCGTC GGGCTCGTGA TCATCGTCGG CTCGGCCGCC 
AGACTGGGCG GAACGGTAGC CTTCCTGCTG GCATTCGGGA TCGCCTGGTA TCTCCTCGCA
GCACGCGACA TCGGCTTCGC GGCAGCTCGC AACGCGCTGG ACATCAAGCT CCTGCCGCCG
ATTTGGCGAC GCGGCAACTG GATGTGGCTC GACACATTGT TCGGAGACGG CGACAAGCTG
CTGAAGGCGG CGACGGTCGC ACTCGCAGTG ACCGGCGCGG GATTGATGTT CAGGGCTGAC
ATCGTCTACG GCGCCGCCCT GCTGATCGCC GCGTTCTACG TCTCCGAAAT CCTGCGCGGA
ACCCGGGCGC CACCACCCCG TGGGGTGCGA ATTCCCGATG CCAGCGCACA TGGCGTGCTG
ATCGAGACCG CTCCAGCCAT TGCGCCGCCG ACGGCGGCGC TCGCCGCGCC GGCGACCACG
GTCCTTTCCG CGATCGTTGC GCCGCCGATC ATCCCCGCCG CGACCCGCCG CGTGCTCGTC
GTCCGCGCGC GCGAACTACA CAAGCCGGTG GTGCTGAAGC AGCGTCCCAT CGGCCGGCGC
CCCGACGCGA AGCGGACGAA GCGTCCTGCG CGCGACAGGT CCAAGCAACC ACAGCCGCAA
CTGCCGAGCC GCAAGCCGGA CCACCCGATC GCGATCCGCC GTCGCAAACC GCAGCGGCCA
AGGCCGCTGC TCCGTCGCCG GACGATCTGC AAGCCGTCCA CCCCGGTCGG CCGACGTAGC
CAGAGACCGG TCATCGCCAT CCGGCGTTAG
 
Protein sequence
MKDWFAACAV GLVIIVGSAA RLGGTVAFLL AFGIAWYLLA ARDIGFAAAR NALDIKLLPP 
IWRRGNWMWL DTLFGDGDKL LKAATVALAV TGAGLMFRAD IVYGAALLIA AFYVSEILRG
TRAPPPRGVR IPDASAHGVL IETAPAIAPP TAALAAPATT VLSAIVAPPI IPAATRRVLV
VRARELHKPV VLKQRPIGRR PDAKRTKRPA RDRSKQPQPQ LPSRKPDHPI AIRRRKPQRP
RPLLRRRTIC KPSTPVGRRS QRPVIAIRR