Gene RPB_3612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3612 
Symbol 
ID3911414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4148170 
End bp4148685 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content64% 
IMG OID637885514 
ProductMarR family transcriptional regulator 
Protein accessionYP_487218 
Protein GI86750722 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.463026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.818554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GATCTGTTTC CCGGAAGCCG AACCGAAAAG CATCAGAGCG GCCCGAGGCG 
AGAGGTCCGA CGCTCGATCT CGAGCGTTAC GTGCCGGCCT TCATCACCTT CATCGCCAAC
AAGCTGTCGA ACAGCGCCAC CGCGTTCTAT CAGGGCCATT TCGGCGTCAA CGTCACCGAA
TGGCGGATGA TGTCGCTGCT GGCGATCGAG CCCGGGATTT CGGCGGCGCG AATCTGCGAG
GTGATCGGTT TCAACAAGGG GCCCGTCAGT CGCACGCTCG CGGACATGCA GCAGCGCGGC
CTGATCGCCA TCCGCACCGA CCCGGACGAT GGCCGGACCC ACTCGATTTC GCTGACGGCG
AAGGGGCGCG CGACGCACGA CAAGGTGATC GTCGCCGCGC TCGAGCGCGA GCGGCGGCTG
ATGTCGTGCC TGAACAAGAG TGAGCAGGAG GTGCTGATCG ATCTGCTGCG GCGGCTGCAC
GACAATCTCG ACGCCGTCAC CGGCGACAAG GTGTAG
 
Protein sequence
MTARSVSRKP NRKASERPEA RGPTLDLERY VPAFITFIAN KLSNSATAFY QGHFGVNVTE 
WRMMSLLAIE PGISAARICE VIGFNKGPVS RTLADMQQRG LIAIRTDPDD GRTHSISLTA
KGRATHDKVI VAALERERRL MSCLNKSEQE VLIDLLRRLH DNLDAVTGDK V