Gene RPB_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3578 
Symbol 
ID3911380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4102740 
End bp4103546 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID637885480 
Productenoyl-CoA hydratase 
Protein accessionYP_487184 
Protein GI86750688 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0354874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.705605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACAG GAAACGCCTC CGCCGCGACG CTCGCGGACC CCTCGACTCT GGTGATCGAC 
ACCGTCGGCT CGGTGCTGAC GGTCGGCCTC AACCGTGCCA AGAAACGCAA TGCGCTGAAC
GACGGCCTGA TGGCCGCGCT GAAGGATTGC TTCGACGATC TGCCGGCCGA CATCCGCTCG
GTGGTGATCC ACGGCATCGG CGATCACTTC TCCGCCGGCC TCGATCTGTC GGAGCTGCGC
GTGCGCGACG CCACCGAAGG GCTGGTGCAT TCGCAGACCT GGCACCGGGT GTTCGACAAG
ATTCAATATT GCCGCGTGCC GGTGATCGCG GCGCTGAAGG GCGCGGTGAT CGGCGGCGGG
CTCGAACTGG CCTGCGCCGC GCATATCCGC GTCGCCGAGC CGTCGGCCTA CTACGCACTG
CCGGAAGGCA GCCGCGGCAT TTTCGTCGGC GGCGGCGGAT CGGTGCGCCT GCCGCGGCTG
ATCGGCGTGG CGCGGATGGC CGACATGATG CTGACCGGCC GGGTGTATTC GGCAACCGAA
GGCGTCGTGC ACGGTTTCTC GCAATATCTG TCGGAAGACA AAACCGCCTA CGACAAGGCG
CTCGAACTCG GCAATCGCGT CGCCCAGAAT GCGCCGCTGA CCAATTTCGC GGTGCTGCAG
GCGCTGCCGA TGATCGCCGA GGCCAATCCG CAGACCGGTC TGCTGATGGA ATCGCTGATG
GCGACGGTGG CGCAGAGCGA CCAAGAGGCC AAGAACCGGA TTCGCGACTT CCTCGATCAC
AAGACCGCAA AGGTTAAACC GACCTGA
 
Protein sequence
MLTGNASAAT LADPSTLVID TVGSVLTVGL NRAKKRNALN DGLMAALKDC FDDLPADIRS 
VVIHGIGDHF SAGLDLSELR VRDATEGLVH SQTWHRVFDK IQYCRVPVIA ALKGAVIGGG
LELACAAHIR VAEPSAYYAL PEGSRGIFVG GGGSVRLPRL IGVARMADMM LTGRVYSATE
GVVHGFSQYL SEDKTAYDKA LELGNRVAQN APLTNFAVLQ ALPMIAEANP QTGLLMESLM
ATVAQSDQEA KNRIRDFLDH KTAKVKPT