| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3574 |
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| Symbol | |
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| ID | 3911376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4097913 |
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| End bp | 4098698 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885476 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_487180 |
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| Protein GI | 86750684 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.319685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.435247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGC AGATCGTCAC GCATCGGGAC GCGATCAACT ATACCGCGGG GCGGATGGCG
CTGGCGGGCG GGCTGACCGC GCTGGTGACG CTGCTCTTCC TTCTCTCCGA TCTCGGCGCC
GACGCCAAGG CTCTGGTGCC GGTCGGCGAG GTGCAACATG CATCCCTGAT AGTCGCGGTC
GGCGTATCGA CCGTCCTGTC GGGGGCGCTG AGTTATCGCT CGGCGATCCT GATGCGGCAG
TTGACGCTGA CCCGCGCGGA ACTGGCGCGG ATCTCGCGCA CCGATCCCTT GACCGGGCTG
CTCAACCGGC GCGGCTTCGA CGACGCGGCC GCGCCCTTGC TGGCGCAGGC CGCGGCGGCG
GGGCAGCGCG TGGTCGCGCT GATGTGCGAC ATCGACCGCT TCAAGACGAT CAACGACCGC
TACGGGCACG ACGCGGGGGA TCGCGTACTC GCCCGGATCG GCACCATTCT GAGCGACTTC
GCCGAAGCCA ATGGTGCGGT GATCGCCCGC CACGGCGGCG AGGAATTCGC CGGCCTGATG
GTCGGAGTCA GCGACGAGGA GGCCACCCGC TACGCGCAGG CCCTGTGCAA GCTGTGCTCG
ACCGACGTGG CAGGAAACGA CGTCGCGGTG CCGGTGACCA TGAGCTTCGG CCTCGCCACG
CATCTGCCGG GCGGCGATCT CGCCGCGCTG ATGCGCCGGG CGGATCAGGC GCTGTATCGC
GCCAAGGATC TCGGCCGCAA TTGCGTCGTG CAGATCGACG AGCTGGAAGC CGTGGCGGCC
TGCTAG
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| Protein sequence | MTKQIVTHRD AINYTAGRMA LAGGLTALVT LLFLLSDLGA DAKALVPVGE VQHASLIVAV
GVSTVLSGAL SYRSAILMRQ LTLTRAELAR ISRTDPLTGL LNRRGFDDAA APLLAQAAAA
GQRVVALMCD IDRFKTINDR YGHDAGDRVL ARIGTILSDF AEANGAVIAR HGGEEFAGLM
VGVSDEEATR YAQALCKLCS TDVAGNDVAV PVTMSFGLAT HLPGGDLAAL MRRADQALYR
AKDLGRNCVV QIDELEAVAA C
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