| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3562 |
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| Symbol | |
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| ID | 3911364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4078477 |
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| End bp | 4079874 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885464 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_487168 |
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| Protein GI | 86750672 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.409097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTC CCCGCGATCT GCTCGCTGAC CTGTGGACCT CCGTCGGCGG CGATGCTGCC
GCGCTCGACG CCGTCACGCT CACCGGCGAC GAGCCGCAAT TGCCGTCGTC GTTCCGGGTC
GATGCGGCGG CGCAAGTGTC GATCGCCGCG AGCGGGCTCG CTGCGGCAGA GATCTGGCGG
ATGCGCAGCG GGCAGACACA GCGCGTCAGC GTCGACATGC GCCATGCCGC GATCGAGTGC
CGCTCCGAGC GCTATCTGCG CCGCGACGGC GAACCGCCGC CGCCGATGTG GGATCCGATC
GCCGGCGTGT ATCAGGTGAG GGGTGGCCGC TATGTCCGGT TGCACACCAA CTTTCCGCAT
CATCGCGACG CGGTCTGCAA CGTCTTGCCG TGCGACGCGA CGCGCGAGGC GGTGCAGGCG
GCGCTGCTGC AATGGGACGG CGAAACGTTC GAGACCGCGG CCTACGACGC CGGCGGCGTG
GTGGCGCTGA TGCGGTCGCG CGATGAATGG CAGGCGCTGC CTCAGGCGTC GGCGCTGGAT
GCGCTGCCGC TGGTCGAGAT CAGCAAGATC GGCGAGGCGG CGCCGAAGCC GTGGCCGGCT
GGTGAGCGGC CGCTCGCGGG ACTGCGCGTG CTCGATCTGT CGCGCGTCAT CGCCGGACCC
GTCGCCGGCC GGACGCTGGC GGCGCACGGC GCCGACGTGA TGCTGGTATC AAGTCCCAGG
CTGCCGTCGA TCCCGTGGCT GGTGATCGAC ACCGGCCGCG GCAAGCTGTC GAGCTACGCC
GACCTGACGA CGCCACAGGG GCACGCGGCG TTGCGCGAAC TGCTGAGCGA GGCCGACATC
TTCTCACAGG GCTATCGCCC GCAATCTTTG GCTGCGCTCG GCTTCTCGCC GGAGGAGGCC
GCCGCCATCA ATCCGGGTAT CGTCTATGTG TCGCTCTCCG CCTATGGCCG CAACGGGCCG
TGGGCGACGC GGCGCGGGTT CGATTCGCTG GTGCAATGCG CCACCGGATT CAACCATGCC
GAAGCGCAGG CGGCCGGGGT CGAGGGGCCG AAGGAATTGC CGATGCAGAT CCTCGACCAT
GCCACCGGCT ATCTGATGGC GTTCGGCGCG ATGATCGCCA GGGCGCGGCA GGCGCGCGAA
GGCGGCAGCT GGCACGTCCA ACTGTCGCTC GCCCGCACCG GCAAATGGCT GTGGGAGATG
GGGCGATTGG CGCAAGGCCT CGCCACGCCG GACATCACGC CCGATCTGGC GGCTTCGTAT
ATCGAGGATC TGCCGTCCGG CTTCGGGCGA CTCACGGCCG TGCGCCACGC CGCGATGCTG
TCCGAGACGC CGGCGCATTG GGCGCGACCC GCGGTGCCGC TCGGCACCGA TCCACCAGGC
TGGCCCGCCC GGGGCTGA
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| Protein sequence | MPSPRDLLAD LWTSVGGDAA ALDAVTLTGD EPQLPSSFRV DAAAQVSIAA SGLAAAEIWR
MRSGQTQRVS VDMRHAAIEC RSERYLRRDG EPPPPMWDPI AGVYQVRGGR YVRLHTNFPH
HRDAVCNVLP CDATREAVQA ALLQWDGETF ETAAYDAGGV VALMRSRDEW QALPQASALD
ALPLVEISKI GEAAPKPWPA GERPLAGLRV LDLSRVIAGP VAGRTLAAHG ADVMLVSSPR
LPSIPWLVID TGRGKLSSYA DLTTPQGHAA LRELLSEADI FSQGYRPQSL AALGFSPEEA
AAINPGIVYV SLSAYGRNGP WATRRGFDSL VQCATGFNHA EAQAAGVEGP KELPMQILDH
ATGYLMAFGA MIARARQARE GGSWHVQLSL ARTGKWLWEM GRLAQGLATP DITPDLAASY
IEDLPSGFGR LTAVRHAAML SETPAHWARP AVPLGTDPPG WPARG
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