| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3555 |
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| Symbol | |
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| ID | 3911357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4068972 |
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| End bp | 4069517 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885457 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_487161 |
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| Protein GI | 86750665 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0937754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.766393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCGGAC GTGACGACGA ATGGACCGAC CTGATGCTGT CGGCCAATGC CGGCGATAGC
GTCGCGTATC AGCGGCTGCT GAAGGCCGTG ACGCCGGTAC TGCGGGCCGG CGCCCGCCGG
GGCCTGGCGC GGGCAGGGCA GCCGATCGAC CAATCCGAGG ACATCGTGCA GGAAATTCTG
TTGGCGGTGC ATCTGAAGCG ACACACTTGG GATCCGGAGG CGCCGTTTGC GCCCTGGCTG
TTCGCGATCG CACGCAACAA GCTGATCGAC GCGTTGCGCC GCCGCGGCCG GCGGGTGTTC
GTCAATATCG ACGATTTCGC CGAGACGATC CCGAGCGAAG CGGCGCCGGA GACGCTGCCG
TCCGGCGAGA TCGCGCGGCA CCTCGAGGCT CTGCCGCAGC GCCAGCGCGA GGTGCTGCAA
TCGATCGCGG TCGACAGCGC CTCGATCAAG GACACCGCTA ACAGGCTGTC GATGAGCGAG
GGCGCGGTGC GCGTCGCGCT GCATCGTGGT CTGGCTGCGC TCGCGGCCAA AATGAGATCG
GTCTGA
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| Protein sequence | MRGRDDEWTD LMLSANAGDS VAYQRLLKAV TPVLRAGARR GLARAGQPID QSEDIVQEIL
LAVHLKRHTW DPEAPFAPWL FAIARNKLID ALRRRGRRVF VNIDDFAETI PSEAAPETLP
SGEIARHLEA LPQRQREVLQ SIAVDSASIK DTANRLSMSE GAVRVALHRG LAALAAKMRS
V
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