Gene RPB_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3541 
Symbol 
ID3911343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4052163 
End bp4052951 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID637885443 
Producthypothetical protein 
Protein accessionYP_487147 
Protein GI86750651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.509616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCA ATCCACGCGC CACGACGTTT GCCTTACTCG CCGGCTTGCT CGCCTTCTCC 
CCCGCCCTCG CCGAGCCGGC GAAGCCCAAG CCCGACTTCG CGGTGAAGAC CAAGGCGATC
GACGGCAAGG TGCTGCTCGA CGCCGGGATC AAGGCCGATC CGAAGCTCGC GGACAATTGC
CTCACCGAAG GCAAGAAATG GATCGGCGAG CAGCGCGCAG AAGCCGAACC GGAATTCAAG
AGCGACCCGG AGCTGTTCCG CAACGGCCCC TGGACCTATG AGCGCAGCTA CGCGACGGAC
TCGCTGGTCG CGGACCGCTA TGTCAGCGTG CTGCGCACCG ACTACAGCTA CACCGGCGGC
GCGCATCCCA ATACGGACAT CAACACCATC CTATGGGACA AACAGCAGGG CAAGCGCATC
AGCATCCGGC CGTTCTTCAC CGATCTGTCC GACGGCAGCG CCGCGATGCA AGCGATGGTC
AAGGGCGTGC TCACCTCGCT GAAAGCCGAG AAGAAGGCGC GCGGCACCGA GGACGACGGC
GAGGACTACG TCAAGAGCAT CGAACCGAAG CTCTTGACGA TCGGCCCGGT GACGCTCGCC
CGCTCGACCG AAGCCGGCAA GAGCGCCGGC CTGATGTTCC ACTACGCGCC CTATGCGGTC
GGCGCCTATG CGGAGGGTAG CTACGACGCC TACGTGCCGT GGCAGAGTCT GAAGCCGTAT
CTGTCCGCGG AAGGCACCGC GATCTTTGGC GGCGATCGGC CGAAAGGCGA CGATGAACGC
GCCAAGTAA
 
Protein sequence
MSLNPRATTF ALLAGLLAFS PALAEPAKPK PDFAVKTKAI DGKVLLDAGI KADPKLADNC 
LTEGKKWIGE QRAEAEPEFK SDPELFRNGP WTYERSYATD SLVADRYVSV LRTDYSYTGG
AHPNTDINTI LWDKQQGKRI SIRPFFTDLS DGSAAMQAMV KGVLTSLKAE KKARGTEDDG
EDYVKSIEPK LLTIGPVTLA RSTEAGKSAG LMFHYAPYAV GAYAEGSYDA YVPWQSLKPY
LSAEGTAIFG GDRPKGDDER AK