Gene RPB_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3539 
Symbol 
ID3911341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4051464 
End bp4051778 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content62% 
IMG OID637885441 
ProductDNA polymerase, beta-like region 
Protein accessionYP_487145 
Protein GI86750649 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.418484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.469828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCA TTGCCGACAT GCCGCTGGAC AAGATCGTCG CGAAGCTGGT CGAGCTCACG 
CCTGCGATCA AGGCTCTGGG CGTCACGCGG CTGGCGGTGT TCGGCTCCCG CGCTCGGGGG
GATGCGCGCG TCGACAGCGA CCTCGACATT CTGGTCGATA CGACGGCCTA TGGAGAAGCC
CCCGCATTCG ATCTCTTCAA GGTGATGCAT CTGATCGAAG ACGAGACCGG AATCCGGACG
CAGATCACGA CACGGACGGA ACTGAAGCCT CGGATCGTCG AGCGGATCGC AGACGACGTC
GTCGAGGTCT TCTAG
 
Protein sequence
MTAIADMPLD KIVAKLVELT PAIKALGVTR LAVFGSRARG DARVDSDLDI LVDTTAYGEA 
PAFDLFKVMH LIEDETGIRT QITTRTELKP RIVERIADDV VEVF