Gene RPB_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3533 
Symbol 
ID3911335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4045003 
End bp4045869 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID637885435 
Productdihydropteroate synthase 
Protein accessionYP_487139 
Protein GI86750643 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.139072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.316671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG CGCAGCAAAC CCCAGCGCCT CCCACCGCGA CCGGCGCCGC CGCGTTGCGG 
GCGCTGCTGG CGCGCCCGGT GCCGGTGGTG ATGGGCATTC TCAACGTCAC CCCCGATTCG
TTCTCCGACG GCGGCGACTT TCTCGGGCCC GAGCGGGCGC GGGCGCATGC GGCGCGGATG
ATCGCGGACG GCGCCGACAT CATCGACATC GGCGCCGAGA GCACCCGCCC CTACGGGTCG
ACGCCGGTCT CGGCCGACGA GGAGCGGCGG CGGCTGGCGC CGGTGCTGGC GGCGGTCGCA
GCACTCGGCG CGCCGGTGTC GATCGACAGC ATGAAGGCCG AGGTGGTGGC CTGGGCGCTC
GACCATGGGG CTGCGATCGC CAACGACGTC TGGGGCCTGC AGCGCGATCC GGCGATGGCG
GAGGTCGTCG CGGCGCGCGG CGCGCCGGTG ATCGTGATGC ATAATCGCGA CGACGCCGAC
CCGTCGATCG ATATCGTCGC TGATATCAAC GCGTTCTTCG AACGCTCGCT GGCGATCGCC
GCCCGCGCCG GCATCGCCGA GCACAGCATC GTGCTCGATC CCGGCATCGG CTTCGGCAAG
ACGCCGCAGC AGAGCATGAT CGCGCTGGCG CGGCTGGGCG CCTTCGCGCA TTTCGGCCTG
CCCGTGCTGG TCGGCGCCTC GCGCAAGCGT TTCATCAGCA CGGTGGCGCC GTCGGAACCG
AAGCAGCGGC TCGGCGGTTC GATCGCCGCG CATCTCATCG CGATGGAGAA CGGCGCGCGA
ATCATCCGCG CCCACGACGT CGCCGACACC GCGCAGGCGC TCAAAGTCGC GCACGCGATC
AGGACCAGCA GCGAGGACAG ACGATGA
 
Protein sequence
MSAAQQTPAP PTATGAAALR ALLARPVPVV MGILNVTPDS FSDGGDFLGP ERARAHAARM 
IADGADIIDI GAESTRPYGS TPVSADEERR RLAPVLAAVA ALGAPVSIDS MKAEVVAWAL
DHGAAIANDV WGLQRDPAMA EVVAARGAPV IVMHNRDDAD PSIDIVADIN AFFERSLAIA
ARAGIAEHSI VLDPGIGFGK TPQQSMIALA RLGAFAHFGL PVLVGASRKR FISTVAPSEP
KQRLGGSIAA HLIAMENGAR IIRAHDVADT AQALKVAHAI RTSSEDRR