| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3459 |
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| Symbol | |
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| ID | 3911261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3969295 |
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| End bp | 3969738 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637885362 |
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| Product | putative phage cell wall peptidase, NlpC/P60 |
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| Protein accession | YP_487066 |
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| Protein GI | 86750570 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | [TIGR02219] putative phage cell wall peptidase, NlpC/P60 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.262752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACAA TTCTCACCCG CGACGCGGTG GTCGCCGAGG CGCGGAGCTG GATCGGCACG
CGCTATCGGC ATCAGGCCTC GGTGAAGGGC GTCGGCTGCG ATTGCCTGGG CCTGGTGCGC
GGCGTCTGGC GCGGCTGCAT CGGCGACGAG CCGGAAGCGC CGCCGCCTTA CGCGCCGGAC
TGGGCCGAGG CGCAGGGTGC GGAGACGCTG GCGGAGGCCG CGCTGCGCCA CCTCGTGCCG
ATCGCGCGCG AGGATTTCCG CGCCGGCGAC GTGCTGCTGT TCCGATGGCG CGACGGCTAC
GTCGCCAAGC ACGTCGCGAT CGCCAGTTCG TCCACGACGA TGATCCACGC CCATGACGGC
GCGGCGGTGT GCGAGATCGC GATCGCGCCG TGGTGGCGGA GACGGTTGGC GTATGCGTTC
GGTTTTCCGG GCGTGAAGGA TTGA
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| Protein sequence | MSTILTRDAV VAEARSWIGT RYRHQASVKG VGCDCLGLVR GVWRGCIGDE PEAPPPYAPD
WAEAQGAETL AEAALRHLVP IAREDFRAGD VLLFRWRDGY VAKHVAIASS STTMIHAHDG
AAVCEIAIAP WWRRRLAYAF GFPGVKD
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