| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3456 |
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| Symbol | |
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| ID | 3911258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3962314 |
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| End bp | 3963114 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885359 |
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| Product | putative glycohydrolase |
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| Protein accession | YP_487063 |
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| Protein GI | 86750567 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3179] Predicted chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.562067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.342093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAATC CCGATTCAAC GGGCGCGATC GTGCGCCATC GCGTCGCGTC CGACTTCGGC
GCGGCCTTGA CGCGCCTGTG GCCCAACGGG GACCAGAAGA TTGCCGGGTT GCGCGCCGGG
ATGATCGGCT CGGCCTCCGA GGTGTTCGCC CGCTACGGCA TCGATACGCC GCTCCTGGTC
GCGCATGTCA TGGCGCAGAT CAGCCACGAA TGCGGGGCGG GGCGCGACAT CGTCGAGAAC
CTGAACTACT CCGCGACGCG GATGATGCAG GTGTGGCCGT CGCGCTTCCG CACGCTGCAG
AGTGCTGCGC CCTATGCGCA CAATCCGCCG GTGCTCGCCG CCAAGGTCTA TAACGGCCGG
ATGGGCAATG CCCCGGGGTC CGACGACGGT TGGAATTTCC GCGGCCGCGG CGCGTGTCAG
ACCACCGGAC GAGAGGGCTA TGCGCGGCTC GCCAGGGTGA CCGGGCTCGA TCTGGTCCGG
CAGCCCGACC TCGTCAACGA TCCTCGCCAT TTCCTGCTGT GCGGCGTCGC CGATTTCGTC
GCCTGCGGCT GTCTGCCGTT CGCCGCGGCC GACGACGTCA CCGGCGTCAC GCGCAGGCTC
AACGGCGGCA CCATCGGGCT GTCGCAGCGC AAGGCCTGGC TGGCGAAATG GAAAGCGGCG
CTGGGCGAGG GCCCGATCGC GATGGCCGCA TCGCCGCCGC TCGCGCCGGA GCTGCCGGTT
GCGCCGACGC GGCCGCAGCC GACGCCATCG CGAGTTGCGC GTTTCATCGC CGTGCTGGCC
GCGGCCTTCA AAAGGAGCTG A
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| Protein sequence | MPNPDSTGAI VRHRVASDFG AALTRLWPNG DQKIAGLRAG MIGSASEVFA RYGIDTPLLV
AHVMAQISHE CGAGRDIVEN LNYSATRMMQ VWPSRFRTLQ SAAPYAHNPP VLAAKVYNGR
MGNAPGSDDG WNFRGRGACQ TTGREGYARL ARVTGLDLVR QPDLVNDPRH FLLCGVADFV
ACGCLPFAAA DDVTGVTRRL NGGTIGLSQR KAWLAKWKAA LGEGPIAMAA SPPLAPELPV
APTRPQPTPS RVARFIAVLA AAFKRS
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