Gene RPB_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3420 
Symbol 
ID3911222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3909405 
End bp3909713 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content66% 
IMG OID637885323 
Productcoenzyme PQQ synthesis D 
Protein accessionYP_487027 
Protein GI86750531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0250463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.633009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGC GCCACATCAG CGTCAGCGAA CAGAGCCGGC CGATGCTGCC GCGCCACGCG 
AAATTGCGTT TCGATGAAAC AAGGCAGCGC TGGGTGATCC TCGCGCCCGA GCGCGTGTTG
GCGCCCGACG ACATCGCGGT CGAGATTCTG CAGCTCTGCG ACGGCGCCCG CAGCGTCGCC
GCGATCATCG ATACGCTGGC GCTGAAATAC ACCGCCGACC GCGCCGAAAT CGGCGCCGAC
GTGATCGCGA TGCTGCAGGA CCTCGCCGAC AAGGGATTCC TCACCGAGGC GCGTGAGAAG
ACGCCATGA
 
Protein sequence
MASRHISVSE QSRPMLPRHA KLRFDETRQR WVILAPERVL APDDIAVEIL QLCDGARSVA 
AIIDTLALKY TADRAEIGAD VIAMLQDLAD KGFLTEAREK TP