Gene RPB_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3401 
Symbol 
ID3911203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3887438 
End bp3888445 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID637885304 
Producthypothetical protein 
Protein accessionYP_487008 
Protein GI86750512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGCG ACTGGTCGCC AAAGGGCATC CCGGCGGTGC GCCAGCAAGC CGAGCGGGCG 
GTCGTCGCCG TGGCGATGGC GAGCGGAATT GGCGCACTGG CGCCCTTGGG TCCCGCAGCG
GCGCAGGATC GGCCAGCATG GCTCGCCGCT GTCGCCTCTC TGCCGGCGAA CCTCTCGCAA
ACCGGCAAGC CGCCGGTGCC GGGCGGTCAC GACGCCAAGG ACATCGATAC CGAGCACATC
TTCGGCTTCA CCATGGGATC GGACATCGGC CGGCGCGGCG ACATCGAAAT CGAGATGGAA
AATGTCGGCG CGTTCGGCAA GCGAAGCGGC GGCTACGCCA CGCTCGCGAC GCTCAACCAG
GTCAAATACA CGGTCACCGA TCGATTCCGC ATCGCGCCGG GCTTCGGCCT CGGCGCCCAG
CGGATCGATG GCGCACCGGG CTACGACGAC CGGCGCCACC TCACCTTCAA CGGCGCGACC
ATGGAATTCC GCTACAAGCT GATCGACAGG ACCTCCGCGC CGTTCGGGCT GACGCTGCAC
GCCCAGCCGG GCTGGAGCCG CGTCGACGAA GGCAGCGGCA GGCGGATCGA GCACTACGGC
GCCGAATTCG CCGCACTGTT CGACCGCGAG CTGATCCCGG ACAAATTGTA CGCCGCCTTC
AACGTCTGGT ACGGCACCGG CGCGACCCGC GAGCGCGCGA CCAGACTGTG GAGCCACGAT
ACCGACCTCG AACTGCACGG CGCGCTGTCC TACGCGTTCG TGCCGGAATT CGTCGCGGGC
GTCGCGCTGC GCTATCTGCG GGCCTATGAT GGCGGCGGCC TCGACCGCTT CGCCGGCGAC
GCGGTGTTCG TCGGTCCGAC CTTCTCCTAC AGCATCACCG ACAGTCTCGG GGTGTCGGGG
ACCTGGCAGA TGCAGGTCGC GGGTGGCGCG CTCGGCGACG ATCGCCGTCT CGACCTCGAC
AATTTCGAGC GCCACCAGGC GATGCTGCGC CTCAATGCGC ATTTCTAG
 
Protein sequence
MRGDWSPKGI PAVRQQAERA VVAVAMASGI GALAPLGPAA AQDRPAWLAA VASLPANLSQ 
TGKPPVPGGH DAKDIDTEHI FGFTMGSDIG RRGDIEIEME NVGAFGKRSG GYATLATLNQ
VKYTVTDRFR IAPGFGLGAQ RIDGAPGYDD RRHLTFNGAT MEFRYKLIDR TSAPFGLTLH
AQPGWSRVDE GSGRRIEHYG AEFAALFDRE LIPDKLYAAF NVWYGTGATR ERATRLWSHD
TDLELHGALS YAFVPEFVAG VALRYLRAYD GGGLDRFAGD AVFVGPTFSY SITDSLGVSG
TWQMQVAGGA LGDDRRLDLD NFERHQAMLR LNAHF