Gene RPB_3284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3284 
Symbol 
ID3911085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3756781 
End bp3757374 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID637885186 
Producthypothetical protein 
Protein accessionYP_486891 
Protein GI86750395 
COG category[R] General function prediction only 
COG ID[COG5350] Predicted protein tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.620137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGC AACGCGAAGC CGGCTTGACG CAGACGCCGC GTCGGCGATA CGACGCCGGC 
GTGATCATCG TCAGCGCCCT CAGCCATGCT CAGGATCTCG TCGCGCGGCT GCGGCCGGCG
CGGTCGCTGT CCTTGATGGC GCCGTGGCAG CGAGTCGTCT TCAACGAGGC CTGGCTGCCC
GAACAACGGC TGATCCTCGC TTTCAACGAC GTCGTCGAGA CCGGCTCCGT CCATGTCGCG
CCGGATGATG CGATCGTGCG CAGCATCATC GAATTCGCGC ACGGCTGTGA AAGCGGTCAG
GACGTTCTGG TGCATTGCTG GATGGGCGTC AGCCGCTCGC CGGCCGCGGC CTATATCATC
GCCTGCGCGC GCGCGCCGGG CGACGAGCAC GCGATCGCCG AGGAATTGCG CCGCTGTTCG
CCGGTGGCGA CGCCGAACCG GCTGATGGTG GCGATTGCGG ATGACATTCT CGCGCGCAAC
GGTCGCATGG TCGAGGCGAT CGAGCACATC GGGCGGGGAG TCGAGTATGA CGGCGACGCC
GCGCCGTTCT GCTTGCGGCT CGACTGGCGC GATGGTCCGG CGCATCAGAT CTGA
 
Protein sequence
MAMQREAGLT QTPRRRYDAG VIIVSALSHA QDLVARLRPA RSLSLMAPWQ RVVFNEAWLP 
EQRLILAFND VVETGSVHVA PDDAIVRSII EFAHGCESGQ DVLVHCWMGV SRSPAAAYII
ACARAPGDEH AIAEELRRCS PVATPNRLMV AIADDILARN GRMVEAIEHI GRGVEYDGDA
APFCLRLDWR DGPAHQI