Gene RPB_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3273 
Symbol 
ID3911074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand+ 
Start bp3745417 
End bp3746049 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID637885175 
ProductTetR family transcriptional regulator 
Protein accessionYP_486880 
Protein GI86750384 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.346529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.756983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA AAGGCGGTCG TCCGCGCAAA GCCGACGGCG AGGCCAAATC GATTCACATC 
ATCGAGACGG CGTCGCGGTT GTTTGCGCAG CAAGGCTACG CGGCGACGTC GGTCGAACAG 
GTCGTCGCGG CGTGCGGGGT CGGCAAGGAC ACGGTGTATC GCCGGTTTCC GTCGAAGCTC 
GCGCTGTTCG AAGGCGTCGT CGAGCATGCG CGTATCCAGA CGCAAGCGCA TTTCCATTCG 
ACGATGGCGG CGGCGGAGAA AGGCGACGTG CTGACACAGT TGCGCGCGGC CGCGCGCTGG 
CTGCTCGCGG TCAATCTCGA TCCGACCCTG ATCGCTTTCA AACGGATTGC CTTCAGTGAG 
GCGCTGGTGG TCGGACAATC GGTCGCCGGC AACAAGCACG ATCCGATCAT GGATCGACTG 
TTCGCCCTGA TCAAAGAGGC GCAGCGCACC GGCGATCTCG CGCCCGGCGA CGTGTCCTTC 
CTCGCGATGC ATCTGCTGAA CTGCGTGGCC GTGGGCCCGA TGATCGACGC CATGCTCGGC 
CGCACGACCT ACGCGTCGAC GCGGGCGCAG AACGCCTATT TCGAGACCGC CTGGAAGCTG 
TTCCTGAACG GAGCTCGTCG CGGCGCGTCG TGA
 
Protein sequence
MTQKGGRPRK ADGEAKSIHI IETASRLFAQ QGYAATSVEQ VVAACGVGKD TVYRRFPSKL 
ALFEGVVEHA RIQTQAHFHS TMAAAEKGDV LTQLRAAARW LLAVNLDPTL IAFKRIAFSE 
ALVVGQSVAG NKHDPIMDRL FALIKEAQRT GDLAPGDVSF LAMHLLNCVA VGPMIDAMLG 
RTTYASTRAQ NAYFETAWKL FLNGARRGAS