Gene RPB_3185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3185 
Symbol 
ID3910986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3641728 
End bp3643089 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content71% 
IMG OID637885087 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_486792 
Protein GI86750296 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCGA CTGATCGCAC AACCAGCGCT GCGAGGCTCG GCACACCGCC GGGGCTGATC 
ATCGCCGCGC CGTCGACCAA CAGCGGCAAG ACCACGGTGA CGCTGGCGTT GCTCGCCGCG
CTGCGTCGCC GCGGCCGCAT CGTGCAGCCT TACAAATGCG GTCCCGACTA CATCGACCCG
GCGTTTCACG CAGCCGCAGC GGGGCGACCC AGCTACAATC TCGACTCCTT CGCCTTTTCG
CCCGGCCGGA TCGCCGCGCT GCTCGAGGCG GCAGCCGGCG CGGACCTCTG CATCGCCGAA
GGCGTGATGG GGCTGTTCGA CGGCGGCAGC ACGACAGGCG CGTGGGGCAA TGGCGCCACC
GCCGATATCG CCGCGGCCAC CGGCTGGCCG GTGGCGCTGG TCATCGACGT CGCCGGCCAG
TCGCAATCCG CCGCTGCGCT GGCGCTGGGC TTTGCGAACT ACCGGAGCGA CGTGAGGCTG
GCCGGCGTGA TCCTCAACAA CGTCGCCAGC GCGCGGCACG AGGCGCTGGT CCGCGCCGGC
TTCACGACGC AGAGCATTCC TGTGCTGGGC ACGCTCGCAC GACATGCCAG CAGCGCTATC
AAGAACCGCC ATCTCGGGCT GGTGCAGGCG CGCGAACACG CGTCGCTGGA CGAGCGGCTC
GATGTGCTCG CCACCCTGGC CGAACAGGGC ATCGACCTCG ACGCGCTCGA ACGCGCCGCC
GTCCCGTCGC ACTTCGATAC CCCGGCGACG CCCCGCATCG CACCGCCCGG CCAGCGCATA
GCGCTCGCCA GCGACGACGC CTTCTCCTTC ATCTATCCGC ATCTGCTCGC CGGATGGCGC
GCCGCCGGCG CGGAGATCGT GCCGTTCTCG CCGCTCGCCG ACGAAGGACC CGATGATACG
TGTGATGCGG CCTGGCTGCC GGGCGGCTAT CCCGAACTCC ATGCCGGCCA ACTCGCGGCG
GCGACGCGCT TCAAATCCGC GCTGACGCGC TTTGCGCAGA CCCGCCCGGT GCACGGCGAA
TGCGGAGGCT ACATGACGCT CGGCGCCGGC CTGATCGATG CCGACGGGCA GCGCCACGCG
ATGGTCGGCT TACTTGGTGT CGAAACCGAT TTCGCCCAGC GCAAGCTGCA TCTCGGTTAT
CGCGTCGCGA CGCTGCAGAC GCCGGCCGCC GGCCACCCCG CCGGCTGCGT CCTGCGCGGT
CACGAATATC ACTATGCCCG CGTGCTCGGC GTGGCCGACG ACCCGCTGGC ACGGATCTGC
GATGCCGCCG GTGCGCCGAC CAGCGAGACC GGCAGCCGGC GCGGCCACGT GAGCGGGACG
TTCTTCCACC TGATCGACGT CGCGCAGGAG CCCGTCGCCT GA
 
Protein sequence
MPATDRTTSA ARLGTPPGLI IAAPSTNSGK TTVTLALLAA LRRRGRIVQP YKCGPDYIDP 
AFHAAAAGRP SYNLDSFAFS PGRIAALLEA AAGADLCIAE GVMGLFDGGS TTGAWGNGAT
ADIAAATGWP VALVIDVAGQ SQSAAALALG FANYRSDVRL AGVILNNVAS ARHEALVRAG
FTTQSIPVLG TLARHASSAI KNRHLGLVQA REHASLDERL DVLATLAEQG IDLDALERAA
VPSHFDTPAT PRIAPPGQRI ALASDDAFSF IYPHLLAGWR AAGAEIVPFS PLADEGPDDT
CDAAWLPGGY PELHAGQLAA ATRFKSALTR FAQTRPVHGE CGGYMTLGAG LIDADGQRHA
MVGLLGVETD FAQRKLHLGY RVATLQTPAA GHPAGCVLRG HEYHYARVLG VADDPLARIC
DAAGAPTSET GSRRGHVSGT FFHLIDVAQE PVA