| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3139 |
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| Symbol | |
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| ID | 3910940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3588267 |
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| End bp | 3590636 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885041 |
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| Product | trimethylamine-N-oxide reductase (cytochrome c) |
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| Protein accession | YP_486746 |
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| Protein GI | 86750250 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.167271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.249922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAGA CCAACGACAT GAACGACGGC TGGAGCACGC ACAGTTCGCA TTGGGGCGCC
TTCTCCGCGC GCTGGGACGG ACGAGCCCTC GAGGTCGAAC CGGATGCGGG CGACCCGGCG
CCCTCGCCCA TCCTGGAAAA TTTCACCGAC GCGTTGCGAC ACAAGGCCCG GATCGAACGG
CCGATGGTTC GGCAAAGCTG GCTGGACAAA ACCGGCGCCG AACGCACATT CGACGGCGCG
TTCGTCGAGT TGCCGTGGGA CGAAGCGCTC GACCTTCTCG CCGCCGAACT GTCGCGCGTT
CACGCCGGCT ACGGCGCCGC CGCGATCTTC GGCGGCTCCT ATGGCTGGGC CAGCGCCGGC
CGCTTTCATC ACGCGCAGAG CCAGATCCAC CGGTTTCTGA ATGTTGCGTT CGGCGGTTAC
GTCCGCTCGG TCAACAGCTA CAGCGCCGGC GCGTCCGCGG TGATCCTGCC GCATGTGCTG
GGGTCGTTCG AAGCGCTGTC GCGCCGCAAC GTCACCTGGG AGCAGGTCAG CGAGCATACC
GACACGGTGC TTGCATTCGG CGGCATGGCG CTGAAAAATT CGATGGTGGC GAGCGGTGGC
ATCAGCCGGC ATGTCGAACG CGATGCGATG CAGAAGGCCG CACAGCGCGG CACCCGATTC
TACTGCATCA GCCCGCTGCG CGACGATCTG CCCGAACAGG CATCGGCGAC TTGGCTTCCG
ATCCGGGTCG GCACCGATGT GGCATTGATG CTCGGCCTCG CGCACAGCCT GGTCGCGGAG
AATCTGCACG ACCGCGACTT CCTCGCGCGC TACTGCACTG GCTACGAGAT CTTCGAGCGC
TATCTGCAAG GCCTCGACGA CGGTCAGCCG AAGCACGCCG GCTGGGCGTC GGGTATCACC
GGCATGGCCG CAGCGGAGAT CGTCGCGCTC GCACGCCAGG CGGCCCGGGG CCGCACGCTG
GTGACGGTGT CGCATTCCCT GCAACGCGCG CAATACGGCG AGCAGCCGGT CTGGATGGGC
GCGGTCCTCG CCGCGATGCT CGGGCAGATC GGCCTGCCGG GCGGCGGCTA CAACTACGCG
CTCGGCGCGC TCGGCCACAC CGGCCGGCAG GTCAATGCCG TGCCGATTCC CACCATGCCG
CAAGGGCGCA ACGGCGTCGA AGAATTCATT CCGGTGGCGC GGATCAGCGA CATGCTGCTC
CATCCCGGCC AGCCGTTCGA GTACAACGGC CGCACGCTCC GCTATCCGGA CATCAAGCTG
GTGTACTGGG CCGGCGGCAA TCCGTTTCAC CATCACCAGG ACATCAACCG GCTGCGCCGT
GCCTTCAACG TGCCGCAGAC CATCGTGGTG CACGAGACCG CGTGGACGGC GAGCGCACGC
TTTGCCGACA TCGTGCTGCC GGCGACGATG ACACTCGAGC GCGACGACAT CGGCGCCGCG
GCGACCGATC CGCGGCTGAT CGCGATGCGC AAGGTCGCGC CTCCGGTCGG CGAAGCGCGG
GACGATTTCG AGATCTTCGC CGCGTTGGCA CGGCGCCTCG GCGTCGAACA GGCTTACACC
GAGGGCCGCG ACAGCCGGCA ATGGCTCGAG CATCTCTACG AGACCACGCG CGCCGCGCTC
GAAGCCAAGG GCTGGGACGC GCCGGCCTTC GACGAATTCT GGCGTCGTGG CGAACTGGCG
CTGCCGTCGG AGCCGGACGA CGGCGGACTT TTGCGCGCGT TCCGCGACGA CCCCGATGCG
CACAAATTGC CGACGCCGAG CGGCCTGATC GAGATCTTCT CGTCGACGAT CGCGTCCTTC
GACTACGCGG ATTGTCCCGG CCACCCGACT TGGTTGCCGG CGACCGATCA GCCGACCCCG
CGGCATTCGT TGACGCTGAT CGCCAATCAG CCGGCGACGC GCCTGCACAG CCAGCTCGAC
TTCGGTCGCT ACAGCCAGTC GAGCAAGATC GCCGGCCGTG AGGTGGTGCG GCTCAACCCC
GCCGATGCGC AATCGCGCGG CATCGTCGCC GGCGACATCG TCCGCATCTT CAACGATCGC
GGTGCCTGCC TGGCGGCCGC AGCGATCTCG GACGCCGCCG CGGCCGGCGT GATCCACCTG
CCGACCGGCG CGTGGTACGA CCCGCTGCCG GACGGCGGCG ACCGCCCGCT TTGCGTCCAC
GGCAATCCGA ACGTGCTGAC GCGCGACATC GGCACGTCGC GGCTGGCGCA AGGCTGCACC
GGTCAGGTGA CCGTCGTCGA ATGTGAGAAA TACGCGGGTC CCATTCCACC GATCCGCGCC
TTCGATCCGT CGGCGCCGGT GAAGCGACGA CGCGTCACTC CGTCTCCGGC CGACGGCGAC
GGCGCCGCGA CGGAGCGCCG CCAGGCATAA
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| Protein sequence | MTETNDMNDG WSTHSSHWGA FSARWDGRAL EVEPDAGDPA PSPILENFTD ALRHKARIER
PMVRQSWLDK TGAERTFDGA FVELPWDEAL DLLAAELSRV HAGYGAAAIF GGSYGWASAG
RFHHAQSQIH RFLNVAFGGY VRSVNSYSAG ASAVILPHVL GSFEALSRRN VTWEQVSEHT
DTVLAFGGMA LKNSMVASGG ISRHVERDAM QKAAQRGTRF YCISPLRDDL PEQASATWLP
IRVGTDVALM LGLAHSLVAE NLHDRDFLAR YCTGYEIFER YLQGLDDGQP KHAGWASGIT
GMAAAEIVAL ARQAARGRTL VTVSHSLQRA QYGEQPVWMG AVLAAMLGQI GLPGGGYNYA
LGALGHTGRQ VNAVPIPTMP QGRNGVEEFI PVARISDMLL HPGQPFEYNG RTLRYPDIKL
VYWAGGNPFH HHQDINRLRR AFNVPQTIVV HETAWTASAR FADIVLPATM TLERDDIGAA
ATDPRLIAMR KVAPPVGEAR DDFEIFAALA RRLGVEQAYT EGRDSRQWLE HLYETTRAAL
EAKGWDAPAF DEFWRRGELA LPSEPDDGGL LRAFRDDPDA HKLPTPSGLI EIFSSTIASF
DYADCPGHPT WLPATDQPTP RHSLTLIANQ PATRLHSQLD FGRYSQSSKI AGREVVRLNP
ADAQSRGIVA GDIVRIFNDR GACLAAAAIS DAAAAGVIHL PTGAWYDPLP DGGDRPLCVH
GNPNVLTRDI GTSRLAQGCT GQVTVVECEK YAGPIPPIRA FDPSAPVKRR RVTPSPADGD
GAATERRQA
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