| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3135 |
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| Symbol | |
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| ID | 3910936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3582812 |
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| End bp | 3584110 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885037 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_486742 |
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| Protein GI | 86750246 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.339139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACTG AGACATTGAC GAAATCGGAT GCGATCACCG AGAGCCTGCG GGCCGCCGTC
GATCGCAATT TCGACGACCA GGTCGCGTTT CTCCAGCGCA TGGTGCAGTT CCGCAGCTTG
CGCGGCGAGG AGGCGCCGCA GCAGGCATGG CTGGCGCAGC AATTCGCCGC GCGTGGCTAC
AAGGTCGATA CGTTCAGTCT CGCCGACGTC GATATCGCCA GCCATCCCAA GGCGGCGCCG
ATGGATACGA TTGATCCGGC CGGCTCGATG CAGGTCGTCG CCACCGCCGA GAGCGATGGC
AAGGGCCGCA GCCTGATCCT GCAGGGCCAT ATCGACGTGG TGCCGGAAGG CCCGGTCGAT
CTATGGAGCG ATCCACCGTT CGAGGCCACA GTTCGCGACG GCTGGATGAT CGGCCGCGGC
GCGCAGGACA TGAAGGGCGG CGTGTCGGCG ATGATCTTCG CGCTGGATGC GATCCGAGCC
GCCGGCTACG CGCCCGACGC GCGCGTGCAT GTGCAGACGG TGACCGAAGA GGAAAGCACC
GGCAACGGCG CGCTCTCGAC GCTGATGCGC GGCTATCGGG CCGATGCCTG CCTGATCCCC
GAGCCGACCG GCCACACGCT GACGCGCGCT CAGGTCGGTG CGATCTGGTT CCGGCTGCGG
GTGCGCGGCA CGCCGGTTCA CGTCGCCTAT TCGGAGACCG GCACCAGCGC CATTCTGTCG
GCGATGCATC TGGTGCGCGC GTTCGAGGAC TACACCAAGA CGCTGAATGC GGCGGCGGTG
CGCGATCCGT GGTTCGGGCA GATCAAGAAC CCGATCAAGT TCAATGTCGG CATCATCAAG
GGTGGCGACT GGGCGAGTTC GACCGCCGCA TGGTGCGAAG TCGATTGCCG CCTCGGTCTG
CTCACCGGCG ATACGCCGGA AGAGGCGATG CGCGGCATCG AGAAATGCCT CGCCGATGCG
CAGGCGGCCG ACGCCTTCCT GTCGGAAAAT CCAGCCGAAC TGATCTGGAG CGGCTTCAAG
GCCGATCCAG CGGTGTGCGA GCCGGGCGGC GTGGCGGAAT CCGTGCTCGC TTCTGCGCAT
AAAACGGCCT TCAATGCGCC GCTCGACGCC CGGCTGTCTA CGGCCGTCAA CGACACCCGT
TACTACTCGG TCGACTACGG CATTCCGGCG CTGTGCTACG GACCCTACGG CCAGGGGCCG
CACGCGTTCG ACGAGCGCAT CGATCTCGAA AGCCTGCGCA AGACGACGCT GAGCATCGCG
CTGTTCGTCG CGGAATGGTG TGGGCTGAGG AAGCTGTGA
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| Protein sequence | MTTETLTKSD AITESLRAAV DRNFDDQVAF LQRMVQFRSL RGEEAPQQAW LAQQFAARGY
KVDTFSLADV DIASHPKAAP MDTIDPAGSM QVVATAESDG KGRSLILQGH IDVVPEGPVD
LWSDPPFEAT VRDGWMIGRG AQDMKGGVSA MIFALDAIRA AGYAPDARVH VQTVTEEEST
GNGALSTLMR GYRADACLIP EPTGHTLTRA QVGAIWFRLR VRGTPVHVAY SETGTSAILS
AMHLVRAFED YTKTLNAAAV RDPWFGQIKN PIKFNVGIIK GGDWASSTAA WCEVDCRLGL
LTGDTPEEAM RGIEKCLADA QAADAFLSEN PAELIWSGFK ADPAVCEPGG VAESVLASAH
KTAFNAPLDA RLSTAVNDTR YYSVDYGIPA LCYGPYGQGP HAFDERIDLE SLRKTTLSIA
LFVAEWCGLR KL
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